Tickets¶

This page lists individual work tickets that went into LSST Science Pipelines releases. For broad descriptions of these tickets, see the release notes.

Tickets Addressed in 2018 Summer Release (v16_0)¶

DM-2948: Remove explicit buildbot dependency on datarel [lsst_distrib]
DM-6576: Change RADECSYS to RADESYS in our code base [afw, ip_diffim, meas_base, meas_extensions_astrometryNet]
DM-7652: Replace usage of execfile in astrometryNetDataConfig.py [meas_extensions_astrometryNet]
DM-8159: Overflow converting to int error in metadata.add [pipe_base]
DM-9435: Document uses of pex::exceptions [pex_exceptions]
DM-9801: Doxygen warnings in astshim [astshim]
DM-9832: Cleanup and unify star selector call signatures [meas_algorithms, meas_astrom, meas_extensions_astrometryNet, obs_ctio0m9, pipe_tasks]
DM-9837: Refactor meas_astrom/catalogStarSelector to new BaseClass [meas_astrom]
DM-10299: Apply crosstalk correction in decam [ip_isr, obs_decam]
DM-10319: _filename functions return first mappable repository even when file does not exist [daf_persistence]
DM-10486: warpExposure and warpImage do not test correctly for dest = src [afw]
DM-10495: turn on travis and flake8 protections in jointcal [jointcal]
DM-10797: Refactor meas_algorithms/objectSizeStarSelector to new BaseClass [ip_diffim, meas_extensions_psfex, obs_lsstSim, obs_sdss, obs_subaru, pipe_tasks]
DM-10984: Write “user guide” documentation for firefly_client [firefly_client]
DM-11162: Replace all use of Coord and subclasses with SpherePoint [afw, astshim, coadd_utils, ip_diffim, ip_isr, jointcal, meas_algorithms, meas_astrom, meas_base, meas_extensions_astrometryNet, meas_extensions_convolved, meas_extensions_photometryKron, meas_extensions_psfex, meas_extensions_shapeHSM, meas_modelfit, meas_mosaic, obs_cfht, obs_decam, obs_lsstSim, obs_sdss, obs_subaru, obs_test, pipe_tasks, skymap, synpipe, validate_drp]
DM-11953: Improve MaxPsfWcsSelectImagesTask [pipe_tasks]
DM-12354: Running the deblender with multiple threads livelocks [pipe_base]
DM-12404: Update stack with new deblender API [meas_deblender]
DM-12420: Write up a short how to for using synpipe [synpipe]
DM-12635: Write initial Gen2->Gen3 conversion script [skymap]
DM-12973: Add HiPS image to Python API [firefly_client]
DM-13129: Warnings in test_camGeomFitsUtils.py [afw]
DM-13163: Refactor ap_pipe to use CmdLineTask primitives [obs_base, obs_cfht, obs_comCam, obs_ctio0m9, obs_decam, obs_lsstSim, obs_monocam, obs_sdss, obs_subaru, obs_test]
DM-13232: Python PropertySet.set mis-handles array of bool [daf_base]
DM-13272: Confirm jointcal’s astrometry output [jointcal]
DM-13339: shebang needs to be changed in several places in bin.src directories [obs_decam, obs_test, pipe_tasks]
DM-13417: Cleanup error reporting and docstrings in cameraGeom.utils [afw]
DM-13475: display.zoom() fails with %matplotlib inline [display_matplotlib]
DM-13493: BaseSourceSelectorConfig should not filter on “interpolated” [jointcal, meas_algorithms]
DM-13509: Some pure python packages add to LD_LIBRARY_PATH [meas_extensions_convolved, obs_cfht, obs_lsstSim, skymap]
DM-13517: “IndexError: cannot do a non-empty take from an empty axes” in making coadd [meas_algorithms, pipe_tasks]
DM-13530: Generalize ingestion to non-HiTS data [obs_decam]
DM-13609: Undo EXTRACT_PRIVATE override in ip_diffim [ip_diffim]
DM-13637: WarpCompare: Bad amps eat up temporal budget [pipe_tasks]
DM-13655: Phase out MemoryError and TimeoutError from pex::exceptions [afw, daf_base, pex_exceptions]
DM-13669: Track and log measurement/reference outliers separately [jointcal]
DM-13671: Add option to skip cholmod.update step [jointcal]
DM-13696: Investigate to standardize image objects to Exposure class type [afw, obs_sdss]
DM-13727: Remove skypix from stack dependencies [obs_base, obs_comCam, obs_ctio0m9, obs_lsstSim, obs_monocam, obs_sdss, obs_subaru, obs_test]
DM-13732: Ensure TaskRunner.__call__ log messages get output promptly [ctrl_pool, pipe_base]
DM-13742: Fix plot names to include filter. Add outputPrefix option to validateDrp. [validate_drp]
DM-13750: Move Record printing to C++ [afw]
DM-13756: Add descriptions to datasets [obs_base]
DM-13768: Fix firefly_client uploads to work with server on https [firefly_client]
DM-13770: Write a stand-alone task to convert/consolidate source tables to parquet files for QA [obs_base]
DM-13787: afw::table::SchemaMapper::addMapping calls wrong overload with string literal [afw]
DM-13788: Remove mariadbclient dependency from daf_persistence [afw, daf_persistence]
DM-13790: Remove all use of the geom package [jointcal, meas_base, pipe_drivers, pipe_tasks, skymap]
DM-13803: Bypass handling catches too many exceptions [daf_persistence]
DM-13806: Implement objective function for moment optimization [meas_modelfit]
DM-13808: Synpipe is broken with latest changes to WCS [synpipe]
DM-13822: Remove python_mysqlclient dependency from obs_lsstSim and obs_sdss [obs_sdss]
DM-13823: Remove lsst.utils.multithreading [utils]
DM-13827: ScienceSourceSelectorTask is slowly appending to a table when it can simply do the selection [meas_algorithms]
DM-13834: Add minimum and maximum lambda to filter properties [afw, obs_decam, obs_lsstSim]
DM-13844: DecamNullIsrTask uses incorrect arg order in butler.put [obs_decam]
DM-13847: Investigate AST inefficiencies [afw]
DM-13849: Convert all ap_verify test data to obs_test [obs_test]
DM-13854: Investigate PSF cache misses [afw, meas_base, pipe_tasks, utils]
DM-13873: Add HSC transmission curves to testdata_jointcal [testdata_jointcal]
DM-13876: Write a ParquetStorage Butler storage type [daf_persistence, obs_base]
DM-13877: Write task that computes single consolidated QA table for whole tract [obs_base]
DM-13879: Include meas_mosaic in lsst_distrib [lsst_distrib, meas_mosaic]
DM-13881: Fix fallout in sky frame construction from detection API change [pipe_drivers]
DM-13884: SpherePoint() initializes fields in the wrong order (compiler warning) [afw]
DM-13886: Simplify Transform to contain a Mapping instead of a FrameSet [afw, jointcal]
DM-13888: Log message from DM-13803 is scary [daf_persistence]
DM-13889: fix jointcal numpy warnings [jointcal]
DM-13891: Truncation in the distance returned by afwTable.matchRaDec [afw]
DM-13898: Remove the XYTransform classes [afw, meas_modelfit, obs_lsstSim]
DM-13900: psfex headers are in src [psfex]
DM-13904: Specify Eigen directory in ndarray build [ndarray]
DM-13905: Change SpherePoint.getVector to return a sphgeom UnitVector3d [afw, meas_astrom, meas_extensions_astrometryNet, skymap]
DM-13910: Allow working around compiler check [sconsUtils]
DM-13941: initial sphinx setup for most lsst packages [coadd_chisquared, coadd_utils, display_ds9, log, meas_algorithms, meas_base, meas_deblender, meas_modelfit, obs_cfht, obs_lsstSim, obs_sdss, obs_test, pex_exceptions, pipe_drivers]
DM-13950: Convert assembleCoadd.py to numpydoc [pipe_tasks]
DM-13965: Disable C++ compiler check for pure-python packages [cp_pipe, obs_comCam, obs_ctio0m9, pipe_drivers, pipe_tasks]
DM-13996: Add Sphinx support to ip_diffim [ip_diffim, meas_extensions_photometryKron, meas_extensions_psfex, meas_extensions_shapeHSM, meas_extensions_simpleShape]
DM-13997: Enable numpydoc support for ip_isr [ip_isr]
DM-13998: Enable automatic flake8 testing in skymap [skymap]
DM-14001: Make afw PEP8 compliant and enable auto testing [afw]
DM-14004: Make astshim compliant with the -pedantic compiler flag [astshim]
DM-14007: Fix py2 linter error in skymap [skymap]
DM-14008: Enable TransmissionCurve coaddition for HSC [obs_subaru]
DM-14026: newinstall.sh depends on which – an undocumented dependency [ci_ctio0m9, ctrl_orca, doxygen, python]
DM-14037: Use EXCLUDE_PATTERNS more safely afw Doxygen config [afw]
DM-14066: Make dynamic detection more robust [meas_algorithms]
DM-14073: Minor Numpydoc fixes in pipe_base [pipe_base]
DM-14075: Exclude bad mask plane in nImage for filtering artifact candidates [pipe_tasks]
DM-14097: nightly-release d_2018_04_13 failed (and w_2018_15) [pytest, pytest_forked, pytest_xdist, python_execnet]
DM-14102: Move makePsfCandidates into its own task [meas_algorithms, meas_extensions_psfex, pipe_tasks]
DM-14119: Dynamic detection not robust against extended emission [meas_algorithms]
DM-14121: Output atmosphere transmission curves from FGCM [obs_base, obs_subaru]
DM-14124: scons –clean does not remove pytest cache [sconsUtils]
DM-14126: ExposureCatalog.subset fails when fancy-indexing with a boolean array. [afw]
DM-14132: assertPairsAlmostEqual should print the pairs on failure [afw]
DM-14134: Enable Sphinx support for ip_diffim [ip_diffim]
DM-14135: Convert afw.geom to numpydoc [afw]
DM-14153: Add warn messages for too few meas/ref sources per ccd [jointcal, testdata_jointcal]
DM-14155: Experiment with other source selectors for photometry [jointcal]
DM-14171: Add descriptions for fgcm and transmission datasets [obs_base]
DM-14175: lsst_ci failing [lsst_ci, validate_drp]
DM-14182: Subtract fit from overscan [ip_isr]
DM-14197: Make obs_test data ingestible [obs_test]
DM-14198: Modernize python in afw [afw]
DM-14204: Modernize python in ip_* packages [ip_diffim, ip_isr]
DM-14216: Get DECam running in lsst_ci and validate_drp again [lsst_ci, validate_drp, verify_metrics]
DM-14227: FITS table load failure [firefly_client]
DM-14233: Remove secondMomentStarSelector [meas_algorithms]
DM-14237: Change DecamIngestTask –filetype default from instcal to raw [obs_decam, validate_drp]
DM-14253: Modernize python in meas_base and meas_algorithms [meas_algorithms, meas_base]
DM-14257: matchedVisitMetrics.py is broken [validate_drp]
DM-14275: The distortion in test_wcsUtils.py testDistortion is unreasonable [afw]
DM-14282: IndexError in detectCoaddSources scaleVariance [pipe_tasks]
DM-14287: jointcal now depends on obs_cfht [jointcal]
DM-14291: PolyMap.polyTran does not clear IterInverse [astshim]
DM-14302: verify fails on master, possibly with unexpected Quantity repr [verify]
DM-14308: Need to return a list from readParquet [daf_persistence]
DM-14311: Add subtractAlgorithmRegistry to __all__ in imagePsfMatch.py [ip_diffim]
DM-14342: validateDrp.py is broken [validate_drp]
DM-14353: Fix return type error in Startspan [afw]
DM-14356: Implement putting of matplotlib figures [daf_persistence, obs_test]
DM-14357: Gather metadata entries from the LDF environment in dispatch_verify.py [verify]
DM-14359: Fix data ID handling in ap_* [daf_persistence, pipe_base]
DM-14366: Make pipe_base and pipe_tasks pep8 compliant [pipe_base, pipe_tasks]
DM-14372: Change log level on wcs creation failure from WARN to DEBUG [obs_base]
DM-14377: calexp_camera is an ImageF [obs_base]
DM-14391: Simplify initialization of display_firefly and firefly_client [display_firefly, firefly_client]
DM-14429: Implement RFC-460: move afw.geom content to new geom package [afw, geom, jointcal, meas_algorithms, meas_astrom, meas_base, meas_deblender, meas_extensions_psfex, meas_extensions_shapeHSM, meas_modelfit]
DM-14491: FireflyClient display_url does not make weblink in Jupyterlabdemo [firefly_client]
DM-14506: Segfault when the input SourceCatalog has a different schema at SourceDeblendTask [meas_deblender]
DM-14509: Option to turn sparse matrices into dense ones to explore eigenvalues [jointcal]
DM-14526: processCcd.py HSC data is broken with w_2018_20 [obs_lsstSim, obs_subaru]
DM-14528: w_2018_19 & w_2018_20 coaddDriver is broken [pipe_drivers]
DM-14529: “RuntimeError: Input catalogs for source selection must be contiguous” in ci_hsc [pipe_tasks]
DM-14548: Many refraction functions are documented to return float but return Quantity [afw]
DM-14550: Add new command line option ‘–ignore-blobs’ to dispatch_verify.py [verify]
DM-14552: centos6 4sigma outlier test numeric difference [jointcal]
DM-14553: Modify multiBand to work on DCR subfilter coadds [pipe_tasks]
DM-14596: Synpipe throws exception when trying to insert stars where no data is present [synpipe]
DM-14597: Multiband driver uses wrong method signature in runDetection [pipe_drivers]
DM-14599: Move regularized moments to its own package [meas_modelfit]
DM-14612: Fix race condition in new jointcal matrix dump test [jointcal]
DM-14628: meas_astrom pytest setup is missing E266 [meas_astrom]
DM-14658: Fix Gen3 SkyMap registration after polygon API changes [skymap]

Tickets Addressed in Spring 2018 Release (v15_0)¶

DM-4891: Upgrade doxygen to latest version [base]
DM-5922: Rework camera geometry to use the replacement for XYTransform [afw, astshim, meas_algorithms, meas_astrom, obs_base, obs_cfht, obs_decam, obs_lsstSim, obs_monocam, obs_sdss, obs_subaru, obs_test, pipe_tasks]
DM-6965: Record variance rescaling in coaddition [pipe_drivers, pipe_tasks]
DM-7268: Record source measurement time in the metadata [ip_diffim, meas_base]
DM-8015: VisitInfo repr() and str() should print a useful summary of contents [afw]
DM-8432: Empty Mapper location templates are not detected [obs_base]
DM-9147: Implement global sky subtraction [ctrl_pool, obs_base, obs_subaru, pipe_drivers, pipe_tasks]
DM-9195: Implement improved jointcal photometric fit [jointcal, obs_cfht, obs_decam, obs_lsstSim]
DM-9534: Output jointcal metrics via a metrics logger [jointcal, obs_base, verify, verify_metrics]
DM-9579: nondeterministic random number seeds in MeasurePsf candidate reservation [pipe_tasks]
DM-9817: Doxygen tries to parse pybind11 wrappers [base]
DM-9932: Make afw classes RFC-209 compliant [afw]
DM-9953: Pixels rejected from coaddition and CCD are not masked on coadds [afw, meas_base, obs_sdss, obs_subaru, pipe_tasks]
DM-10066: Provide utility function for wrapping operator<< [afw, jointcal, meas_modelfit, utils]
DM-10152: Fix bug in Box Python stringification [afw]
DM-10342: Switch to C++14 [sconsUtils]
DM-10411: Remove TIMESYS from namesToKeep in readFitsWcs [afw]
DM-10435: Cleanup SDSS PDAC Metadata [cat]
DM-10443: Butler sometimes looks up calibDate from filesystem not calibration registry [obs_base]
DM-10765: Replace existing WCS classes with SkyWcs [afw, astshim, coadd_chisquared, coadd_utils, ip_diffim, ip_isr, jointcal, meas_algorithms, meas_astrom, meas_base, meas_extensions_astrometryNet, meas_extensions_convolved, meas_extensions_photometryKron, meas_extensions_psfex, meas_extensions_shapeHSM, meas_modelfit, obs_base, obs_cfht, obs_decam, obs_lsstSim, obs_monocam, obs_sdss, obs_subaru, obs_test, pipe_drivers, pipe_tasks, skymap, skypix]
DM-10805: Spatially-varying ZOGY option [ip_diffim, pipe_tasks]
DM-10819: Define Endpoint equality [afw]
DM-10849: Incorporate Synpipe into the stack [lsst_distrib]
DM-10902: Stack demo failure with devtoolset-6 [meas_base]
DM-10907: AssembleCoadd option to save image of exposures for each pixel. [obs_base, pipe_tasks]
DM-10957: Add measurement algorithm for point sources on fluff [meas_base]
DM-11016: Add standard library tag file to Doxygen [base, sconsUtils]
DM-11023: Add more information to CoaddPsf.computePsfImage failure [meas_algorithms]
DM-11138: Convert meas_mosaic wcs output to a format directly readable by the butler [jointcal, obs_base, obs_cfht, obs_decam, obs_lsstSim, obs_subaru]
DM-11155: Implement object count metrics [obs_test]
DM-11253: Initial Sphinx docs for pipe_base [pipe_base]
DM-11268: Add intra-CCD crosstalk correction to ISR [afw, ip_isr, obs_base]
DM-11320: Compare add fakes to coadds vs. visit images [pipe_drivers]
DM-11332: Automatically (losslessly) compress image HDUs [afw, daf_persistence, jointcal, meas_base, obs_base, obs_subaru, pipe_drivers, pipe_tasks]
DM-11336: Switch default reference catalog for DECam to PS1 in LSST format [obs_decam]
DM-11356: Confusion of refObjLoader.pixelMargin and matcher.maxOffsetPix [meas_algorithms, meas_astrom, pipe_tasks]
DM-11401: testHtmIndex.py takes over 6 minutes to run [meas_algorithms]
DM-11407: document formatters & the plan for rollout and use in existing storages [daf_persistence]
DM-11432: Implement Robust Coaddition using PSF-matched Warps for Artifact Removal [obs_base, pipe_tasks]
DM-11452: Adapt qa analysis scripts to run on DESC DC1 simulations output [obs_lsstSim]
DM-11456: Write math for new photometry model in jointcal.tex [jointcal]
DM-11514: Modify sconsUtils to use pytest for test execution [base, meas_base, pipe_tasks, sconsUtils]
DM-11516: Let Doxygen report inherited methods inline [base]
DM-11519: Modify jointcal.py to allow visit Id to be calculated using an camera override. [jointcal]
DM-11521: Make task config defaults sensible for all cameras [jointcal, obs_cfht, obs_decam, obs_lsstSim, obs_sdss, obs_subaru, pipe_tasks]
DM-11578: Cleanup public:private: ordering in jointcal headers [jointcal]
DM-11585: Add pytest support to packages [daf_base, geom, ip_diffim, ip_isr, meas_deblender, meas_extensions_photometryKron]
DM-11597: Add lsst.verify to pipelines.lsst.io [verify]
DM-11613: ctrl_execute fails with pytest-xdist [ctrl_execute]
DM-11614: Jointcal does not work with pytest [jointcal]
DM-11618: Bug where a test directory is being used twice caused a race condition and failure [ctrl_execute]
DM-11620: Numerical problem with Gaussian test in meas_base with pytest [ip_diffim, meas_algorithms, meas_base, meas_extensions_simpleShape, meas_modelfit]
DM-11629: Fix typo in __init__.py filename in verify discovered by pytest [verify]
DM-11635: add argument to getTempFilePath() to specify that we don’t care if the file exists on clean-up [utils]
DM-11649: Enable flake8 tests in utils package [utils]
DM-11653: Make obs_ctio0m9, obs_comCam and ci_ctio0m9 py3 compliant [obs_base, pipe_drivers]
DM-11658: Enable flake8 testing in pex_exceptions [pex_exceptions]
DM-11660: Enable flake8 testing in the log package [log]
DM-11661: Enable flake8 testing in daf_base [daf_base]
DM-11662: Enable flake8 testing in pex_policy [pex_policy]
DM-11663: Enable flake8 testing in pex_config [pex_config]
DM-11664: Enable flake8 testing in daf_persistence [daf_persistence]
DM-11667: daf_persistence relies on pex_exceptions installing import aliases [base]
DM-11691: Test failure with butler in obs_sdss [obs_sdss]
DM-11700: Fix non ascii docstring in pipe_base [pipe_base]
DM-11701: Promote FitDonutTask to a CmdLineTask [obs_base, obs_subaru]
DM-11735: fix tearDown race conditions in obs_test [obs_test]
DM-11758: Make WarpType configurable in GetCoaddAsTemplateTask [ip_diffim]
DM-11764: Fix pickling support in daf_base for pybind11 2.2.0 [daf_base]
DM-11771: obs_base fails to build on NFS-mounted systems [daf_persistence, obs_base]
DM-11776: “RuntimeWarning: invalid value encountered in greater/less” in processing HSC data [afw, ip_isr, meas_algorithms, pipe_tasks]
DM-11781: flake8 line length checking is catching shebangs [sconsUtils]
DM-11790: Move jointcal doc to DMTN-36 [jointcal]
DM-11799: Confusing log messages about exitStatus in successful makeSkyMap tasks [pipe_tasks]
DM-11809: Explicitly enable pep8-naming tests [base, meas_base, sconsUtils, shapelet, utils, verify]
DM-11810: meas_algorithms fails on NFS-mounted systems [meas_algorithms]
DM-11853: shebang target should run before tests [sconsUtils]
DM-11861: SqlRegistry raising exception due to missing super.__del__ [daf_persistence]
DM-11862: writeFitsCatalogStorage calls obj.writeFits incorrectly [daf_persistence]
DM-11871: afw.table column access is slow via__getitem__ (as compared to get) [afw]
DM-11885: look in daf_persistence for python2-style calls to super() and replace with python 3 style calls. [daf_persistence]
DM-11894: Speed up SpanSet operations [afw]
DM-11895: Support getting data for current card of FitsChan [astshim]
DM-11905: Fix PhotoCalib defintion to use multiplication [afw]
DM-11911: Update obs_ctio0m9 to work following DM-5922 [obs_base]
DM-11916: Warnings “Extent2I object has no attribute getWidth” when running meas_mosaic, jointcal [jointcal]
DM-11917: Error in coaddDriver following compression changes [pipe_drivers]
DM-11927: Set maxOffsetPix consistently [obs_subaru]
DM-11929: add from builtins import super to registries.py [daf_persistence]
DM-11931: Fix jointcal exit status and doRaise handling [jointcal, pipe_base]
DM-11933: Run SafeClip and CompareWarp in mockCoadd.py [pipe_tasks]
DM-11941: Disable astropy reading of FITS images [afw]
DM-11948: Add option to force detections in coaddDriver [pipe_drivers]
DM-11951: Fixes in AL Decorrelation and Zogy [ip_diffim, pipe_tasks]
DM-11957: Cannot round-trip >7th degree Chebyshev photometry models [afw]
DM-11971: memory leak in astshim isSeries function [astshim]
DM-12003: Add default slot for PSF shape [meas_base, meas_extensions_shapeHSM]
DM-12014: Make sconsUtils use clang when it knows it using clang [sconsUtils]
DM-12021: Pytest should not retry when worker process segfaults [sconsUtils]
DM-12025: Make Transform pickleable [afw]
DM-12029: recompress jointcal’s testdata zeroed images with fpack [jointcal, testdata_jointcal]
DM-12030: Persist parquet tables from pipe_analysis scripts [obs_base, obs_subaru, obs_test]
DM-12040: Errors in test_transformFactory.py [afw]
DM-12041: Fix identification of overrides in write recipes [obs_base]
DM-12061: Eliminate test warnings in test_methods.py [afw]
DM-12070: Include obs_ctio0m9 and obs_comCam in lsst_distrib [lsst_obs]
DM-12085: Camera geometry incorrect and outdated in obs_test [obs_base, obs_test]
DM-12095: FitsCompression doxygen warning [afw]
DM-12101: Add debugging plots to ComareWarpAssembleTask [pipe_tasks]
DM-12102: add input validation for SpherePoint(double, double, AngleUnits) constructor [afw]
DM-12103: Investigate centering for vignetted pupils [afw, obs_subaru]
DM-12108: Add fake sources after wcs update [pipe_tasks]
DM-12117: repositoryCfg.yaml input root not backwards compatible [daf_persistence]
DM-12176: Minor improvements to afwDisplay interface [afw]
DM-12184: Coaddition Tasks cannot assume that N masks can fit in memory [pipe_tasks]
DM-12200: jointcal tests fail when optional testdata_jointcal is not present [jointcal]
DM-12201: pipe_base test failure – error creating .eups cache sub-dir [sconsUtils]
DM-12207: Add color selection for photocal [afw, meas_algorithms, meas_astrom, meas_base, obs_lsstSim, obs_subaru, pipe_tasks]
DM-12217: Fix bitrot in PgsqlRegistry [daf_persistence]
DM-12230: Mapping.applyForward and applyInverse fail on empty arrays [astshim]
DM-12243: Add base_InputCount to forced coadd measurement [meas_base]
DM-12253: Port validate_drp to lsst.verify [verify]
DM-12254: Switch jointcal to default to IndexedRefObj instead of a.net [jointcal]
DM-12263: Add display_matplotlib to lsst_distrib [lsst_distrib]
DM-12264: Temporarily disable link time optimization on GCC [sconsUtils]
DM-12269: Enable lsst.verify to subset specifications by a complete metadata match [verify]
DM-12270: AST persistence is not exact [astshim]
DM-12272: Fix bug in arrayFromVector [astshim]
DM-12310: Figure out why most HSC datasets start with photometry chi2==NaN [jointcal]
DM-12359: send Task log output to stdout [pipe_base]
DM-12370: Add a coadded transmission curve implementation [meas_algorithms]
DM-12373: Add spatially-varying transmission curves to Exposure/ExposureRecord [afw]
DM-12374: Add transmission curve coaddition to coadd Task code [pipe_tasks]
DM-12375: Attach transmission curves during ISR or std_raw [ip_isr, obs_base, obs_cfht, obs_subaru]
DM-12391: Improve error message for case when warpCompare can’t find any psf-Matched warps [pipe_tasks]
DM-12417: yaml dump prepends !!python/unicode to everything [daf_persistence]
DM-12430: Implement simple distortions in matchPessimisticB [meas_astrom]
DM-12431: re-Verify performance of matchPessimistcB with new distorations [meas_astrom]
DM-12445: Set appropriate default configs for CompareWarp Coadds [obs_subaru, pipe_tasks]
DM-12447: Make Detector.transform and Camera.transform support lists of points [afw, ip_isr, jointcal, meas_base, obs_sdss, obs_subaru, pipe_tasks]
DM-12450: Implement RFC-407: improve interface for clobbering vs. reusing outputs [daf_persistence, pipe_base, pipe_drivers, pipe_tasks]
DM-12452: Add FrameDict class [astshim]
DM-12454: Plugin ‘flake8’ could not be loaded: (pyflakes 1.6.0) [sconsUtils]
DM-12473: Add getParallacticAngle() to visitInfo [afw]
DM-12491: Reduce compareWarp I/O [pipe_tasks]
DM-12492: Fix ci_hsc breakage from DM-10443 [obs_subaru]
DM-12513: multimatch optimization 1 [afw]
DM-12514: Improve filtering of artifacts in CompareWarpAssemble [pipe_tasks]
DM-12517: Evaluate (and optionally implement) using SourceDetectionTask in CompareWarpAssemble [pipe_tasks]
DM-12521: Update boost to 1.66 [afw]
DM-12522: Incorporate new color terms [obs_subaru]
DM-12524: AST should still write in FITS-WCS format after offsetting CRPIX [afw, astshim]
DM-12527: base build failure on Ubuntu due to gcc non-detection [sconsUtils]
DM-12529: Enum comparison should use == not is [skymap]
DM-12531: Implement RFC-409: only check configurations/schemas/versions in output repos [pipe_base]
DM-12532: Add capability to use Slurm reservation to allocateNodes.py [ctrl_execute, ctrl_platform_lsstvc]
DM-12539: Fix PSFEx in good seeing [meas_extensions_psfex]
DM-12540: Add HSM moments that use a circular weight function [meas_extensions_shapeHSM]
DM-12595: Failure to load configs when processing HSC data [obs_subaru]
DM-12596: AstrometryTask.distort broken [meas_extensions_astrometryNet]
DM-12599: Implement lossless FITS compression [obs_base]
DM-12602: implement jointcal constrained model fixes to reduce failing factorizations [jointcal]
DM-12611: FrameDict(FrameSet const &) broken [astshim]
DM-12615: Add copy-constructors to astshim objects [astshim]
DM-12656: Update flake8 and pyflakes packages [base, daf_base, daf_persistence, log, meas_base, pex_config, sconsUtils]
DM-12658: base_PixelFlags_flag_clipped not getting set on measurements on CompareWarp Coadds [pipe_tasks]
DM-12664: PsfMatched slivers of calexps are worthless [ip_diffim]
DM-12665: Failure to fail in assembleCoadd [obs_subaru, pipe_tasks]
DM-12670: CalibCombineTask sets variance to NaN(0) if given 1(2) inputs [pipe_drivers]
DM-12690: Make ConstrainedPolyModel actually support initFromWCS [jointcal]
DM-12692: Improve temporal threshold for CompareWarp [pipe_tasks]
DM-12694: Add queue option for allocateNodes.py [ctrl_execute, ctrl_platform_lsstvc]
DM-12697: Fix hollowed out cores of saturated stars in CompareWarp [obs_subaru, pipe_tasks]
DM-12700: Flip CompareWarpAssembleCoaddTask on by default for RC and ci_hsc [obs_base, obs_subaru, pipe_tasks]
DM-12701: Update showVisitSkyMap.py for unique visit and tract identification [skymap]
DM-12722: Test failed during rebuild ip_diffim due to /proc/driver/prl_vtg [utils]
DM-12724: Add slash to /proc [utils]
DM-12740: afw::geom::Transform should be Persistable [afw]
DM-12763: afw test_testTableArchives has uninitialized memory [afw]
DM-12764: Overhaul SkyWcs [afw]
DM-12765: Record filter ratios in HSC coadds [meas_base, obs_subaru, pipe_tasks]
DM-12766: coaddDriver with –cores > 1 produces MPI_Abort(MPI_COMM_WORLD, 1) [pipe_drivers]
DM-12771: Support the new FitsChan SipReplace attribute [astshim]
DM-12779: Rename ip_cpp to cp_pipe and add to lsst_distrib [lsst_distrib]
DM-12798: Add source selection by signal-to-noise ratio [meas_algorithms]
DM-12881: coaddDriver tries to unset doMatchBackgrounds, which does not exist [pipe_drivers]
DM-12918: investigate and merge u/fix_outliers [jointcal]
DM-12924: SpherePoint.offset should work at the poles and for negative offsets [afw]
DM-12931: Ignore EDGE pixels in coaddition [obs_subaru]
DM-12933: Coadd variance scaling should go in Exposure metadata, not task metadata [pipe_tasks]
DM-12947: constructFlat.py fails on HSC [obs_subaru]
DM-12956: sconsUtils driven testing now fails with space in path to python [sconsUtils]
DM-12968: Include INTERP+CR pixels in coadds [obs_subaru, pipe_drivers, pipe_tasks]
DM-12979: y-band background subtraction [obs_subaru, pipe_drivers]
DM-12980: Add display_firefly to lsst_distrib [lsst_distrib]
DM-12985: Bad masking and interpolation around bleeds [ip_isr, obs_decam, obs_subaru, pipe_tasks]
DM-12995: Improve detection thresholds and background with temporary sky objects [afw, meas_algorithms, pipe_tasks]
DM-13046: Fix race condition with temp files in meas_base [utils]
DM-13055: reject NaN centroid sigmas in astrometrySourceSelector [meas_algorithms, meas_base]
DM-13082: test failure due to DM-12968 config move [pipe_tasks]
DM-13084: Be smarter about combining metadata from FITS headers [afw, daf_base]
DM-13096: Add refraction calculation to the stack [afw, obs_lsstSim]
DM-13110: Support ingestion of compressed images [afw, pipe_tasks]
DM-13122: Separate the execution environment metadata from the other metadata in the JSON document sent to SQuaSH (dispatch_verify.py) [verify]
DM-13146: Update HSC defects [obs_subaru]
DM-13155: Fix typo in processEimage [obs_lsstSim]
DM-13162: Fix warning in processEimage [obs_lsstSim]
DM-13166: Update AST to add support for writing SIP terms [astshim]
DM-13182: SpanSet.fromMask produces larger spans than image [afw]
DM-13184: getCcdIdListFromExposures fails to obey order of keys in ccdKeys [pipe_drivers]
DM-13187: jointcal selected_*_refStars is not correctly computed [jointcal]
DM-13189: Add FunctorKey for Boxes [afw]
DM-13227: Refine exposure-wide background subtraction [pipe_drivers]
DM-13231: Make photoCalib outField write to _flux instead of _calFlux [afw]
DM-13237: Implement authentication via access token in lsst.verify [verify]
DM-13243: PhotoCalTask must only match with DirectMatchTask [meas_astrom, pipe_tasks]
DM-13244: Port parallel ingest from HSC [pipe_drivers, pipe_tasks]
DM-13260: Support construction of new HSC calibs [ip_isr, obs_subaru, pipe_drivers]
DM-13269: Improve jointcal debugging output [jointcal]
DM-13316: AST errors when using multiprocessing to return astshim objects [astshim]
DM-13325: warpExposure does not propogate visitInfo [afw, ip_diffim, pipe_tasks]
DM-13336: Add centroid, shape to forced CCD measurements [meas_base]
DM-13345: Improve template and warp variance for Warp Compare [pipe_tasks]
DM-13380: Add base_PixelFlags_flag_inexact_psfCenter [meas_base, pipe_tasks]
DM-13388: Enable visit-level sky subtraction for HSC by default [obs_subaru]
DM-13389: Enable transmission curve attachment for HSC by default [obs_subaru]
DM-13394: Increase default http timeout in lsst.verify [verify]
DM-13395: Drop GaussianCentroid [ip_diffim, meas_algorithms, meas_base]
DM-13396: Fix coadd mask propagation [afw, meas_base, meas_extensions_shapeHSM, pipe_drivers, pipe_tasks]
DM-13408: Fix fringe fix [ip_isr]
DM-13410: Shrink input bboxes in inputRecorder per psfMatched Warp in WarpCompare [obs_subaru, pipe_drivers, pipe_tasks]
DM-13411: Fix compiler warnings in TransmissionCurve implementation [afw]
DM-13412: camera mapper should specify DecoratedImageU instead of ImageU [obs_sdss]
DM-13437: Stop calibration product generation from causing lots of warnings/errors due to inability to create pretty pictures [afw, pipe_drivers]
DM-13440: Check that amplifier gains are >= 0 and set to 1.0 if they are bad after warning [ip_isr]
DM-13485: Fix NB filter transmission curve dataset filenames [obs_subaru]
DM-13498: Add config to make WarpCompare very conservative [pipe_tasks]
DM-13503: Failure to update test checks in DM-13485 [obs_subaru]
DM-13507: Add stable hash to SkyMap objects [skymap]
DM-13511: Some calexps cannot be opened with ds9 [afw]
DM-13520: Add readme to obs_subaru [obs_subaru]
DM-13534: Upgrade ndarray to upstream 1.4.2 [afw]
DM-13539: astshim fails to preserve SIP terms for some TAN SIP when writing FITS metadata [afw]
DM-13548: Update visualizeVisit following makeImageFromCamera change [pipe_drivers]
DM-13553: Deal with large blends [meas_algorithms, pipe_tasks]
DM-13557: Minor config doc fixes for SourceDetectionTask [meas_algorithms]
DM-13571: fix plot_photoCalib bounds [jointcal]
DM-13575: fix minor bug in photometry ipynb [jointcal]
DM-13577: Add FGCM datasets to obs_base for persistence [obs_base, obs_test]
DM-13603: SkyWcs has memory problems [astshim]
DM-13606: Suppress numpy warning from measureApCorr [meas_algorithms, pipe_drivers]
DM-13610: Python 3 buffered error messages don’t escape before MPI abort [ctrl_pool]
DM-13613: Suppress exit status warning from makeDiscreteSkyMap.py [pipe_tasks]
DM-13614: Fix large SBATCH –time [ctrl_pool]
DM-13615: lsst.meas.base.tests.TestDataset allows randomness [meas_base]
DM-13617: tempWideBackground isn’t temporary [meas_algorithms]
DM-13628: Fix BaseHTTPServer and SocketServer imports for Python 3 [ctrl_orca]
DM-13654: Set SENSOR_EDGE in coadds [pipe_tasks]
DM-13680: SkyWcs(FrameDict) is not adequately tested [afw]
DM-13686: Saving a particular FrameSet as FITS-WCS causes a segfault [astshim]
DM-13693: Use overload_cast in pybind11 wrappers to simplify wrapping overloaded functions [astshim]
DM-13694: Revert change to SdssMapper.yaml due to unit test failed [obs_sdss]
DM-13731: Update defects for HSC [obs_subaru]
DM-13741: Tweak background in DynamicDetectionTask [meas_algorithms, pipe_drivers, pipe_tasks]
DM-13746: Modernize use of ndarray in astshim pybind11 wrappers [astshim]

Tickets Addressed in Spring 2017 Release (v14_0)¶

DM-430: Control log levels on a per-plugin basis [meas_base]
DM-903: SourceDetectionTask should only add flags.negative if config.thresholdParity == “both” [meas_algorithms]
DM-2009: Please add cbegin and cend to afw tables [afw]
DM-2186: Move astrometry_net wrapper code from meas_astrom to a new package [jointcal, meas_astrom, obs_monocam, pipe_tasks]
DM-2840: Add support for listing (async) queries [qserv]
DM-3245: Add support for SUBMIT query parsing to czar [qserv]
DM-3804: Fix order of arguments - run method of meas_base SingleFrameMeasurementTask [meas_algorithms, meas_astrom, meas_base, meas_extensions_simpleShape, pipe_tasks]
DM-4043: update memory management in jointcal [jointcal]
DM-4141: cmdLineTasks should provide proper unix return codes [pipe_base, pipe_drivers]
DM-4158: Allow configuring more statistical options for assembleCoadds.py [pipe_tasks]
DM-4232: Variance is set after dark subtraction [ip_isr, obs_cfht, obs_decam, obs_subaru]
DM-4639: modernize afw code and reduce doxygen errors [afw, ip_diffim, meas_algorithms, meas_astrom, meas_base, meas_deblender]
DM-4953: Please eliminate misleading warning when running scons on OSX with SIP [base]
DM-5126: newinstall.sh should directly install miniconda [lsst]
DM-5310: Re-add fake source handling to ProcessCcdTask [pipe_tasks]
DM-5466: obs_decam calibration ingest uses fragile relative paths [obs_decam, obs_subaru, pipe_tasks, testdata_decam]
DM-5637: Add automated linting for GitHub pull requests [utils]
DM-5883: Include more information in DECam registry [obs_decam]
DM-6626: jointcal fails MemoryTestCase [jointcal]
DM-6718: afw table and record should have useful str() and repr() [afw]
DM-7070: Move consts from top of Associations.cc into JointcalConfig [jointcal]
DM-7177: Document interface for new Footprints class [afw]
DM-7199: afwTable’s .getX()/.getY() do not appear in dir() [afw]
DM-7237: Review cat package [cat, db]
DM-7363: convert stack packages from paf policy to yaml policy [daf_persistence, obs_cfht, obs_decam, obs_lsstSim, obs_sdss, obs_subaru, obs_test]
DM-7457: daf_persistence 3e6e15d fails build [daf_persistence]
DM-7468: Work on Swift Butler Storage Trial [afw, daf_persistence, obs_base]
DM-7477: Increase mask plane size to 32 bits [afw, coadd_utils, ip_diffim, meas_algorithms, meas_base, meas_deblender, meas_extensions_shapeHSM, obs_decam, obs_sdss, obs_subaru, pipe_drivers, pipe_tasks, utils]
DM-7611: Implement spatially varying decorrelation kernel in ip_diffim [ip_diffim]
DM-7615: Update tests in shapelet to support pytest [shapelet]
DM-7756: Port pipe_drivers to Python 3 [pipe_drivers]
DM-7894: mapper and butler queryMetadata method badly documented [daf_persistence]
DM-7913: Implement RFC-240: make Angle’s named methods const… [afw, obs_sdss]
DM-8032: Tighten testProcessCcd thresholds once background model is fixed [pipe_tasks]
DM-8105: Missing test case for SpherePoint [afw]
DM-8106: SpherePoint does not have move constructors/assignment [afw]
DM-8108: Update stack code to use new Footprint API [afw, ip_diffim, ip_isr, meas_algorithms, meas_base, meas_deblender, meas_extensions_photometryKron, meas_extensions_shapeHSM, meas_modelfit, pipe_tasks]
DM-8145: Implement spatially varying ZOGY [ip_diffim]
DM-8169: Use -isystem (rather than -I) for include files from external packages [sconsUtils]
DM-8294: Perform cleanup on /qserv partition on IN2P3 cluster [qserv]
DM-8355: AssembleCcdTask failure with Python 2 [ip_isr]
DM-8439: Add wrapper on astshim to take point lists [afw]
DM-8440: Create new Wcs class [afw, astshim]
DM-8467: Wrap lsst_distrib with pybind11 [afw, base, coadd_chisquared, coadd_utils, ctrl_orca, daf_base, daf_persistence, display_ds9, ip_diffim, ip_isr, log, lsst_apps, meas_algorithms, meas_astrom, meas_base, meas_deblender, meas_extensions_photometryKron, meas_extensions_psfex, meas_extensions_shapeHSM, meas_extensions_simpleShape, meas_modelfit, obs_base, obs_cfht, obs_decam, obs_lsstSim, obs_sdss, obs_subaru, obs_test, pex_config, pex_exceptions, pex_policy, pipe_drivers, pipe_tasks, sconsUtils, shapelet, skymap, utils]
DM-8491: Add Psf-matched CTEs and Coadds as independent data products in DRP [ip_diffim, obs_base, obs_cfht, obs_decam, obs_lsstSim, obs_sdss, obs_subaru, pipe_drivers, pipe_tasks]
DM-8520: Create single frame spatial grid mapper processing task [ip_diffim]
DM-8560: Update Scons package to v3.0 [qserv, sconsUtils]
DM-8606: Improve call signature for makeCameraPoint [afw]
DM-8650: Add static code analysis for python [qserv]
DM-8686: Change Child Repo Access to Parent Registries [daf_persistence, obs_base, obs_decam, obs_sdss, obs_subaru, obs_test, pipe_base, pipe_tasks]
DM-8688: testPsfSelectTest fails when run with via pytest *.py [meas_algorithms]
DM-8750: eliminate jointcal compile warnings [jointcal]
DM-8823: Create Pegasus plugin for Orca [ctrl_execute, ctrl_orca]
DM-8830: Fix accounting for fraction of successful measurements [validate_drp]
DM-8842: LeastSqFitter1d(…, unsigned int order) should be signed [meas_astrom]
DM-8914: Improve container build in Jenkins [qserv]
DM-9019: Advanced study on k8s (kubernetes) [qserv]
DM-9039: reorder butler init to be more incremental when building Repositories [daf_persistence]
DM-9045: Remove or revive bitrotted code in meas_modelfit [meas_modelfit]
DM-9049: Enable autolinking in Doxygen [base]
DM-9050: Add flags for sources used in astrometric and photometric calibration [meas_astrom, pipe_tasks]
DM-9060: Add metadata access to get wcs, visitInfo, and calib from a calexp dataset [obs_base, obs_test]
DM-9111: Add rotator information to HSC VisitInfo [afw, obs_lsstSim, obs_subaru, obs_test]
DM-9135: bulk rename of jointcal variables [jointcal]
DM-9140: Ensure __str__ and __repr__ copied from Swig [afw, meas_modelfit]
DM-9153: Add metadata access to get filter, bbox, and detector [obs_base]
DM-9190: Cleanup pybind11 remaining code [base, coadd_chisquared, coadd_utils, display_ds9, ip_diffim, ip_isr, meas_base, meas_extensions_photometryKron, meas_extensions_psfex, meas_extensions_shapeHSM, meas_extensions_simpleShape, obs_subaru, shapelet]
DM-9192: Implement new spatially-variable PhotoCalib model [afw, meas_algorithms]
DM-9229: Pad Psfs before PSF-matching [ip_diffim]
DM-9249: Modify FlagHandler C++ and flagDecorator.py to make flag identification robust [ip_diffim, meas_algorithms, meas_base, meas_extensions_photometryKron, meas_extensions_shapeHSM, meas_extensions_simpleShape, meas_modelfit]
DM-9261: Update git-lfs repositories to address deprecations. [afwdata, testdata_cfht, testdata_decam, testdata_subaru]
DM-9281: Wrap sphgeom with pybind11 instead of swig [sphgeom]
DM-9297: Get jointcal to work with pytest [jointcal, obs_lsstSim]
DM-9315: MarkCompleted threw an exception when a Tracked job could not be located. [qserv]
DM-9316: meas_base tests broken with NumPy 1.12 [ip_diffim, meas_base, meas_deblender, meas_modelfit]
DM-9321: Change qserv to use xrootd features to improve performance on interactive queries. [qserv]
DM-9353: Update configuration for HSC calib construction [obs_subaru]
DM-9364: wcs creation is mandatory [obs_base, obs_cfht, obs_decam, obs_lsstSim, obs_sdss]
DM-9378: remove and replace ctrl_events package dependencies from ctrl_orca [ctrl_execute, ctrl_orca]
DM-9394: Add meas_extensions_convolved to lsst_distrib [lsst_distrib]
DM-9412: Diffim datasets should specify a “level” [obs_base]
DM-9419: lsst.log documentation should cite other lsst.log documentation [log]
DM-9423: Port HSC patch to allow multiple filters in mosaic [obs_subaru]
DM-9431: Please do not use Exception.message [obs_cfht]
DM-9433: ds9.py error code not working as intended [afw]
DM-9434: Fix database creation error in testTimeFuncs.py [cat]
DM-9438: Switch default reference catalog for HSC to PS1 in LSST format [obs_subaru]
DM-9439: Package version checking is non-deterministic [base]
DM-9476: ISR fails in overscan for HSC visit=90738 ccd=33 [obs_subaru]
DM-9495: Fix all jointcal header multiple-inclusion #defines [jointcal]
DM-9502: SpherePoint throws wrong exception for invalid arguments [afw]
DM-9504: lsst_py3 CI failure due to meas_extensions_ngmix [afw]
DM-9506: Make astrometry distortion model configurable [jointcal]
DM-9520: Remove calibrateTask.py example from Stack (for now) [pipe_tasks]
DM-9521: Remove runIsrTask.py example from Stack (for now) [ip_isr]
DM-9523: update lsstsw/newinstall EUPS version [lsst]
DM-9526: add tarball production to weekly tag/release jenkins’ job [lsst]
DM-9531: Fix override warnings in afw [afw]
DM-9541: Bug related to MPI pickling when running coaddDriver [ctrl_pool]
DM-9553: Investigate the best algorithm to compute derivatives for the Brighter-Fatter correction [ip_isr]
DM-9556: All NaNs in coord_ra and coord_dec columns in deepCoadd forced src tables [meas_base, meas_extensions_photometryKron, meas_modelfit, pipe_tasks]
DM-9564: Set assembled Coadd Psf to modelPsf with auto-computed dimensions [ip_diffim, pipe_tasks]
DM-9567: Create Donut Fit Pipeline [afw, obs_base, obs_subaru]
DM-9572: Include instrument model in cameraGeom [afw, obs_base, obs_subaru]
DM-9574: Log all measurement exceptions at debug level [meas_base]
DM-9577: Ignore focus CCDs in singleFrameDriver [obs_subaru]
DM-9595: Allow Transform to return its inverse [afw, astshim]
DM-9598: Allow Transform to return a matrix of derivatives [afw]
DM-9599: Support concatenation of Transforms [afw, astshim]
DM-9629: Research: how to implement spatially varying PSF for spatially-varying ZOGY and AL(decorrelated) [ip_diffim]
DM-9669: Butler(root=”foo”) should not warn about mapper class instance [daf_persistence]
DM-9670: Reduce the time it takes to send a user query to workers. [qserv]
DM-9672: Query deployment to the cluster hangs with very large number of chunks. [qserv]
DM-9706: WISE object ids are strings and this is causing a problem with qserv [qserv]
DM-9747: Fix build error in obs_lsstSim [pipe_tasks]
DM-9750: Clean up and stackify matchPessimisticB code [meas_astrom]
DM-9751: Verify the performance of new matchPessimisticB code on selected test fields [meas_algorithms, meas_astrom]
DM-9752: Add jointcal to lsst_distrib [lsst_distrib]
DM-9757: Add stat table usage options to mysql config file [qserv]
DM-9764: SOURCE_IO_NO_FOOTPRINTS and related enums should be properly wrapped in pybind11 [afw, meas_base]
DM-9765: Suspicious numerical precision code in Angle [afw]
DM-9776: Install Kubernetes at CC-IN2P3 [qserv]
DM-9783: Improve documentation of processing example data sets with validate_drp [validate_drp]
DM-9794: Pass both LSST_LIBRARY_PATH and DYLD_LIBRARY_PATH in scons on Mac OS [sconsUtils]
DM-9795: CModel priors are weighted incorrectly relative to likelihood [meas_modelfit, obs_subaru]
DM-9806: update lsstsw/newinstall to EUPS 2.1.2 [lsst]
DM-9810: Make PSFEx oversampling configurable [meas_extensions_psfex, obs_subaru]
DM-9811: Add 1.3 arcsec target seeing for convolved flux measurement [obs_subaru]
DM-9812: Clean up outputs from CharacterizeImageTask and CalibrateTask [meas_astrom, obs_base, obs_subaru, pipe_tasks]
DM-9828: Enable rectangular binSizes in SubtractBackgroundTask [meas_algorithms]
DM-9829: validate_drp broken on decam dataset as of 03/15 [validate_drp]
DM-9846: Improve handling of error messages [astshim]
DM-9848: obs_subaru test failures possibly related to daf_persistence [daf_persistence, obs_base]
DM-9853: Clean up makeVisitInfo docstring [afw]
DM-9855: Select images for coadd based on PSF quality. [obs_subaru, pipe_tasks]
DM-9856: Add option to deblender to turn off smoothing. [meas_deblender]
DM-9862: Update meas_mosaic’s wcs/fcr output files to reflect LSST coordinate system [afw, meas_astrom]
DM-9863: Replace use of makeVisitInfo(… with VisitInfo(…) [ip_isr, obs_base, obs_cfht, obs_decam, obs_lsstSim, obs_subaru, obs_test, pipe_tasks]
DM-9866: Make change to remove flagDecorator (RFC-302) [meas_base]
DM-9871: Move wcs and fcr datasets out of {pointing} directory in obs_subaru [obs_subaru]
DM-9872: Validation of obs_comcam [obs_base]
DM-9874: Increase matcher.numBrightStars [obs_subaru]
DM-9882: Add integrate interface to BoundedField/ChebyshevBoundedField [afw]
DM-9885: Rename deepCoadd_srcMatch as deepCoadd_measMatch [obs_base, obs_cfht, obs_decam, obs_lsstSim, obs_sdss, obs_subaru, pipe_tasks]
DM-9895: FrameSet frames not preserved by Transform(frameSet) constructor [afw]
DM-9897: conda channel errors causing lsstsw/bin/deploy to fail [lsst]
DM-9899: FrameSet.permAxes will fail if nIn != nOut [astshim]
DM-9905: Change WARN to DEBUG for raw data without a WCS [ip_isr]
DM-9909: hsc cat format change breaks processing of validation_data_hsc [validate_drp]
DM-9917: Add a callback to cameraGeom.showCamera [afw]
DM-9918: Robustify sqlite use [daf_persistence]
DM-9925: PolyTran should not provide an iterative inverse by default [astshim]
DM-9939: Stop transposing data in Mapping.tranForward and tranInverse [afw, astshim]
DM-9946: Remove debugging example refcount.cc [astshim]
DM-9952: Change our interpretation of FITS HDUs to be 0-indexed [afw, obs_base]
DM-9961: Add treecorr to validate_drp and lsst_ci dependencies [validate_drp]
DM-9967: ctrl_pool should not accept a default for –time on real batch systems [ctrl_pool]
DM-9974: Correct scheduling for certain interactive queries [qserv]
DM-9985: Reduce Wcs pickle size [afw]
DM-9986: Add a persistable for PropertyList [afw]
DM-9990: Update Detector information as needed [afw, ip_isr]
DM-9998: Enable fake sources on coadds [pipe_drivers, pipe_tasks]
DM-10000: Create/revive CModel model data residuals display [meas_modelfit]
DM-10004: Write brief guide to building PSF-matched coadds [ip_diffim, pipe_tasks]
DM-10006: Don’t overwrite Filter/Detector in _standardizeExposure [obs_base]
DM-10008: MapBox.maxOutCoord not set to nout if specified as 0 during construction [astshim]
DM-10009: Ensure masks are valid from ImageMapReduceTask [ip_diffim]
DM-10039: Incorrect docs for CatalogCalculationConfig [meas_base]
DM-10042: Update mariadb statistics on 35TB dataset [qserv]
DM-10069: Remove boost_thread Qserv dependency [qserv]
DM-10091: Fix problems left over from DM-9952 [afw, daf_persistence, obs_base]
DM-10093: Revert disabling of meas_modelfit dependency in lsst_apps [lsst_apps]
DM-10096: Add unit test asserts for SpherePoint, SpherePointList and PointList [afw, ip_diffim, ip_isr, meas_algorithms, meas_astrom, meas_base, meas_extensions_simpleShape, obs_base, obs_cfht, obs_decam, obs_lsstSim, obs_test, pipe_tasks, shapelet, skymap]
DM-10100: Add qhttp C++ HTTP server library to qserv builds [qserv]
DM-10101: bad exception handling in afw for python3 [afw]
DM-10105: Inconsistency in meas/forced wcs leads to CModel failure [afw]
DM-10108: Stop wrapping __div__ for BoundedField [afw]
DM-10116: Add ChebyMap to astshim [astshim]
DM-10146: Fix minor doc typos [astshim]
DM-10193: Remove subaruLib import from crosstalkYagi [obs_subaru]
DM-10206: Fix obs_decam compatibility with 0-indexed HDUs [obs_decam]
DM-10212: Check memory locking in containers [qserv]
DM-10221: Allow –id to use any key in the registry [pipe_base]
DM-10226: Fix code layout in jointcal [jointcal]
DM-10229: pipe_base tests try to write to obs_test [pipe_base]
DM-10231: FileForWriteOnceCompareSame does not respect umask [daf_persistence]
DM-10233: getInfoFromMetadata() throws away errors without warning. [pipe_tasks]
DM-10235: Bug in coaddDriver when selecting images by PSF quality. [obs_subaru]
DM-10237: Error in blendedness debiasing calculation [meas_base]
DM-10252: getOutputId() assumes keys will exist, and doesn’t use butler to retrieve them [pipe_drivers]
DM-10253: Construct master calibs for obs_ctio0m9 [pipe_drivers]
DM-10257: Fix compiler warnings in afw [afw]
DM-10263: Add libcurl to qserv eups table file [qserv]
DM-10265: Include table persistence docs in Doxygen listing for afw [afw]
DM-10267: Port HSC support for PostgreSQL registries to LSST [daf_persistence, obs_base, pipe_tasks]
DM-10268: Butler cannot read a repo using the realpath when it was created with a link [daf_persistence]
DM-10270: isrTask does not provide config option for defects [ip_isr]
DM-10271: Fix order of operations when using temporary local backgrounds in detection [afw, meas_algorithms]
DM-10274: Transform is not assignable [afw]
DM-10281: compiler warnings in astshim [astshim]
DM-10283: Add ability to join different databases. [qserv]
DM-10286: Update cmake in qserv base containers to latest from jessie-backports [qserv]
DM-10287: Add measurement plugin to store footprint area [meas_base]
DM-10288: afwImage.TanWcs.cast() not supported anymore in jointcalCoadd [jointcal]
DM-10289: record.setValidPolygon(xxx) does not accept None as a valid input anymore [afw]
DM-10292: The FrameSet returned by Transform.getFrameSet can change the contained FrameSet in Python [afw]
DM-10297: Fix “double treerings” [obs_decam, pipe_tasks]
DM-10308: Add support for box regions and magnitudes in brightObjectMasks [pipe_tasks]
DM-10314: Uprade to kubernetes/kubeadm v1.6.1 on openstack [qserv]
DM-10315: Mask bad channels in ccd=33 [obs_subaru]
DM-10328: len(propertySet) throws an exception in Python [daf_base]
DM-10336: DM-10271 seems to have broken afw [afw]
DM-10338: Mix of tabs and spaces in breaks meas_base builds [meas_base]
DM-10340: parent repository properties are dropped when loaded via child repositories. [daf_persistence, obs_test]
DM-10347: Please fix the typo in afw/display/ds9.py [afw]
DM-10359: Reconstruct measurement pixels from a SourceRecord [meas_base]
DM-10374: Recover and load SDSS PDAC metadata [cat]
DM-10381: Enhance test for meas_deblender’s clipFootprintToNonzeroImpl [meas_deblender]
DM-10386: Add Constructor documentation to Footprints [afw]
DM-10392: Upgrade kubernetes/docker on cc-in2p3 cluster [qserv]
DM-10393: correct variable name in sites.xml template [ctrl_platform_lsstvc]
DM-10394: astshim attribute page titles have Doxygen commands [astshim]
DM-10401: getPackageDir raises RuntimeError instead of pex::exceptions::NotFoundError [utils]
DM-10410: Update starlink_ast [astshim]
DM-10426: Identify stable version of kubernetes and docker on openstack [qserv]
DM-10429: Write a version of the warper that uses SkyWcs and compare performance [afw]
DM-10430: Add time stamps to the standard outputs to BatchCmdLineTask [ctrl_pool]
DM-10438: Add DCR model data types [obs_base, obs_test]
DM-10448: Use 79 character line length in utils [sconsUtils]
DM-10449: Restore bad pixel masks [obs_subaru]
DM-10451: Activate CModel prior fix [obs_subaru]
DM-10452: Create bboxFromIraf function in obs_base utils [obs_base]
DM-10453: Fix bugs in matchPessimisticB [meas_astrom]
DM-10469: Add support for pipe_analysis in obs_subaru [obs_subaru]
DM-10485: Protected methods should not use private method naming convention [astshim]
DM-10487: obs_cfht needs to be updated in order to be compatible with latest CFHT data [obs_cfht]
DM-10490: Cache camera in HscMapper [obs_subaru]
DM-10496: test_chebyMap.py sometimes segfaults [astshim]
DM-10497: Fix minor typos in main.dox [pipe_base]
DM-10504: Make more stringent cuts to input visits for HSC [pipe_tasks]
DM-10505: Robustify validate_drp fitting and catching errors. [validate_drp]
DM-10506: Run blendedness by default [meas_base]
DM-10508: Remove writing of warped template added in DM-8145 [ip_diffim]
DM-10510: Squash some compiler warnings in afw [afw]
DM-10514: Check qserv/qserv:dev works correctly [qserv]
DM-10521: Create script to produce release performance table [validate_drp]
DM-10525: Fix xrootd random crash [qserv]
DM-10526: newinstall.sh should not default to using tarball binary packages [lsst]
DM-10530: don’t set filter if the filter ID is not UNKNOWN (instead of testing if filter is None) [obs_base]
DM-10535: Incomplete subchunk list causing query to fail. [sphgeom]
DM-10541: Add properties to image classes [afw, obs_base]
DM-10542: Replace XYTransform::linearizeTransform [afw]
DM-10552: Upgrade display_firefly to work with more servers [afw]
DM-10558: disable or remove butler caching [daf_persistence, obs_base]
DM-10559: afw.image.makeWcs() returns null pointer without warning [afw]
DM-10561: Switch to LSST capitalization and properties in Python [afw, astshim]
DM-10562: Provide POC for bundling xrootd as a microservice [qserv]
DM-10574: Hit AssertionError in deblender [meas_deblender]
DM-10575: obs_decam build takes 10 minutes [obs_decam]
DM-10587: newinstall creates faulty loadLSST.csh file [lsst]
DM-10598: Include pixels flags in forced measurement [meas_base]
DM-10602: Cancel a user query when the result becomes too large. [qserv]
DM-10608: Disable Config history [log, pex_config]
DM-10610: Optimise SpanSet components used by CModel [afw]
DM-10621: ArgumentParser’s butler doesn’t output calibs in the calib storage [pipe_base]
DM-10623: Mismatching dataId in logger output [log, pipe_base]
DM-10633: Increase CmdLineTask multiprocessing timeout [pipe_base]
DM-10686: RingsSkyMap.findAllTracts() behaves oddly at poles [skymap]
DM-10728: Near-term jointcal acceptance: make jointcal and meas_mosaic use the same output formats [afw, daf_persistence, obs_base, obs_subaru]
DM-10729: Near-term jointcal acceptance: make validate_drp use meas_mosaic outputs [afw, validate_drp]
DM-10734: Fix InfileMerger queryIdStr [qserv]
DM-10737: Make meas_mosaic use new reference catalogs by default [obs_subaru]
DM-10749: New filters for HSC [obs_subaru]
DM-10751: Fix module versions [base, ctrl_pool, meas_base, meas_deblender, meas_extensions_psfex, obs_decam, obs_subaru, pipe_base, pipe_drivers, pipe_tasks, shapelet, skymap]
DM-10760: Switch warpType from enum to strings [pipe_tasks]
DM-10764: Rename Transform::of and Mapping::of to ::then [afw, astshim]
DM-10767: fix py3 build after tickets/DM-7363 [daf_persistence]
DM-10777: Create TransformBoundedField [afw, astshim]
DM-10778: Add metadata access for Filter [obs_base, obs_test]
DM-10785: setBrightObjectMasks does not properly construct footprint. [pipe_tasks]
DM-10799: Rename Transform::tranForward to applyForward [afw, astshim]
DM-10803: Refactor grid generation in ImageMapReduceTask [ip_diffim]
DM-10804: Spatially-varying A&L decorrelation option [ip_diffim]
DM-10808: Add defect on ccd=43 [obs_subaru]
DM-10818: Fix array continuity for ndims > 2 in FITS writing [afw]
DM-10834: CmdLineTask -j multiprocessing hangs with long data ID lists [afw]
DM-10835: Add color terms for NB filters [obs_subaru]
DM-10837: Fix eimageIsr import [obs_lsstSim]
DM-10846: Enable automatic printing of C++ backtrace on segfault [sconsUtils, utils]
DM-10871: Add unit test for MDC overwriting [log]
DM-10901: Support not needing to specify all fields when creating calibrations. [pipe_drivers]
DM-10905: Add jobId and retry number to result tables. [qserv]
DM-10924: Add verify (and verify_metrics) to lsst_distrib [lsst_distrib]
DM-10926: Incompatibility with NumPy 1.13 [afw]
DM-10930: Robustify tests/repository.py [daf_persistence]
DM-10931: Fix variable name bug and remove print statements in matchPessimisticB. [meas_astrom]
DM-10939: Fix macOS compilation problems with Qserv [log, qserv]
DM-10942: MatrixMap with all zeros cannot be simplified [astshim]
DM-10943: References to TranForward and TranInverse are confusing [astshim]
DM-10945: update eups to 2.1.3 to improve tarball package installation [lsst]
DM-10946: Non-square MatrixMap composed with a ShiftMap cannot be simplified [astshim]
DM-10947: Allow linearizeTransform and affineTransform to simplify their mappings [afw]
DM-10953: Give ModelPsfMatchTask ablilty to match to all PSF types [afw, ip_diffim, meas_algorithms, meas_extensions_psfex]
DM-10965: FootprintSet setter unable to accept results from getter [afw]
DM-10970: Remove rows from cancelled jobs from the result table [qserv]
DM-10971: Switch to using jemalloc. [qserv]
DM-10973: Make SkyWcs transform to IcrsCoord instead of SpherePoint [afw]
DM-10997: remove dependencies on lsst package [lsst_distrib]
DM-11008: Unable to construct CoaddBoundedFieldElement without a validPolygon [meas_algorithms]
DM-11009: Automatic backtrace printing is unhelpful [utils]
DM-11010: Footprint.transform may be transforming the wrong position [afw]
DM-11022: Create HSC calibs for 2016 September - 2017 April [pipe_tasks]
DM-11026: Remove use of PsfAttributes from image subtraction tasks [datarel, ip_diffim, pipe_tasks]
DM-11031: Expand defect mask on HSC ccd=43 [obs_subaru]
DM-11033: Problem with exists/getStorage() with composite datatypes [daf_persistence, obs_base]
DM-11051: Change logger level for wcs warning [afw]
DM-11052: Enhance afw table to support variable-length string data [afw]
DM-11090: Identify regression in HSC astrometric matching success rate between w_2017_17 and w_2017_25 [obs_subaru]
DM-11091: Fix multibandDriver attempting to run detection when no data present [pipe_drivers]
DM-11095: Add reference catalog flux support to photometry fitter [jointcal, testdata_jointcal]
DM-11136: Fine-tune calib construction mechanics [obs_base, pipe_drivers, pipe_tasks]
DM-11137: testSafeFileIO fails with too many open files on Python 3 and Terminal [daf_persistence]
DM-11159: Push to docker-hub containers produced by Travis continuous integration [qserv]
DM-11163: Always create VisitInfo from metadata when available [obs_base]
DM-11164: Write suitable metadata for VisitInfo when writing calibrations [pipe_drivers]
DM-11166: Fix typo in log message [obs_base]
DM-11172: Test cancellation code for failed worker or network connection. [qserv]
DM-11190: Immediate return for qserv disconnected queries [qserv]
DM-11191: Result retrieval for qserv disconnected queries [qserv]
DM-11196: Move yaml camera model to obs_base [obs_base]
DM-11215: Enable validateDrp.py to run from JSON file. [validate_drp]
DM-11217: Butler+CmdLineTask cannot output to a (non-repo) folder where some files already exist [daf_persistence, obs_decam]
DM-11218: ingestCalibs.py should put the registry in the output directory [pipe_tasks]
DM-11219: Please add an option –ignore-ingested to ingestCalibs.py [pipe_tasks]
DM-11220: ingestImage.py should not stop after failing to ingest a file [pipe_tasks]
DM-11224: Problems setting noclaim shutdown time via allocateNodes.py [ctrl_platform_lsstvc]
DM-11236: Image constructors do not obey INHERIT [afw, obs_decam]
DM-11237: Please turn down verbosity of sipterms.cc test [afw]
DM-11243: Refine PSF-based image selection [pipe_tasks]
DM-11251: add support for the standardize function for composite datasets [daf_persistence, obs_base]
DM-11267: Add an option to not interpolate over saturated pixels [ip_isr]
DM-11269: Please move “Empty WCS extension, using FITS header” from INFO to DEBUG [afw]
DM-11277: Use posix interpretation of empty globs when ingesting [pipe_tasks]
DM-11280: Update configs missed in DM-10469 [obs_subaru]
DM-11284: Butler writes many copies of identical entries _parents to repositoryCfg.yaml [daf_persistence, obs_base]
DM-11289: RepositoryArgs needs to check that mapperArgs is dict-like [daf_persistence]
DM-11296: Butler loading registry messages are at inconsistent logging levels [obs_base]
DM-11300: Fix kwargs passing (outputPrefix is None error) in validate_drp [validate_drp]
DM-11302: Include DATE-OBS in calibration products headers [pipe_drivers]
DM-11306: Remove pre-pybind11 hack from CalibTask.updateMetadata [pipe_drivers]
DM-11326: Add <exposure>_bbox dataset [afw, obs_base]
DM-11335: obs_cfht tests fall over due to -9999.9 for TELEAZ for calibs [obs_cfht]
DM-11338: Make choice of interpolation kernel for CoaddPsf configurable [meas_algorithms, pipe_tasks]
DM-11339: Fix weirdly formatted check_astronomy plots [validate_drp]
DM-11351: Fix display’s writeBasicFits for MaskX change (used by e.g. display_ds9) [afw]
DM-11352: Display a Wcs for the 0-indexed pixel coordinates when no other Wcs is present [afw]
DM-11353: afw.cameraGeom.makeUpdatedDetector sometimes offsets amplifier bboxes when flipping [afw]
DM-11354: Make afwDisplay callback message cut-and-pastable [afw]
DM-11360: CatalogCalculation plugins can get added in non deterministic order [meas_base]
DM-11369: ValueError from SafeClipAssembleCoaddTask.detectClip [pipe_tasks]
DM-11378: Remove config option to make PSF-matched warps with old and wrong order of operations [pipe_tasks]
DM-11388: Update hscConfig.py in validate_drp/config to get new location LoadAstrometryNetTask [validate_drp]
DM-11403: Adapt to new exit feature in pipe_base [ctrl_pool]
DM-11410: validate_drp incorrectly outputs filenames as ‘_<filter>.json’ [validate_drp]
DM-11411: On python3 sys.platform is linux and not linux2 [qserv]
DM-11421: Fix unicode support in obs_lsstSim [obs_lsstSim]
DM-11429: tests/testPhotoCal.py fails on 2017-07-31 “master” [afw]
DM-11442: afw fails to install via eups if afwData not installed [afw]
DM-11454: Modify UnitNormMap to round trip zero-length vectors [astshim]
DM-11463: validate_drp plotPhotErrModelFit gives wrong units for sigmaSys [validate_drp]
DM-11467: Fix docker image name generated with travis-ci [qserv]
DM-11487: Fix OSX flakiness in qhttp unit test [qserv]
DM-11514: Modify sconsUtils to use pytest for test execution [afw, jointcal, meas_base, meas_extensions_photometryKron, pex_config, verify]
DM-11514: Modify sconsUtils to use pytest for test execution [afw]
DM-11518: Modify db tests to support pytest [db]
DM-11538: fix a few C++ compiler warns [qserv]
DM-11539: meas_base test_PluginLogs.py depends on global state [meas_base]
DM-11574: Make testDistortion test the distortion [obs_subaru]
DM-11579: Support LOCAL and PARENT in bounding box syntactic sugar [afw]
DM-11585: Add pytest support to packages [coadd_chisquared, coadd_utils, ctrl_execute, ctrl_orca, meas_extensions_simpleShape, meas_modelfit, pex_exceptions, pipe_base, skymap, utils, validate_drp]
DM-11589: pipe_tasks unit test fails under pytest [pipe_tasks]
DM-11593: Migrate qserv to pybind11 [qserv]
DM-11594: test_distortion fails when run from pytest [obs_subaru]
DM-11595: daf_persistence tests fail with pytest-xdist [daf_persistence]
DM-11599: Migrate qserv LUA wrapper from SWIG to native C API [qserv]
DM-11607: obs_base fails with pytest-xdist [obs_base]
DM-11625: Bug in calculation of number-of-detected-in-bands in peak culling [pipe_tasks]
DM-11628: Fix minor bugs in peak culling [pipe_tasks]