ConsolidateHealSparsePropertyMapTask¶
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class
lsst.pipe.tasks.healSparseMapping.ConsolidateHealSparsePropertyMapTask(**kwargs)¶ Bases:
lsst.pipe.base.PipelineTaskTask to consolidate HealSparse property maps.
This task will take all the individual tract-based maps (per map type, per band) and consolidate them into one survey-wide map (per map type, per band). Each tract map is truncated to its inner region before consolidation.
Attributes Summary
canMultiprocessMethods Summary
consolidate_map(sky_map, input_refs)Consolidate the healsparse property maps. emptyMetadata()Empty (clear) the metadata for this Task and all sub-Tasks. getFullMetadata()Get metadata for all tasks. getFullName()Get the task name as a hierarchical name including parent task names. getName()Get the name of the task. getResourceConfig()Return resource configuration for this task. getTaskDict()Get a dictionary of all tasks as a shallow copy. makeField(doc)Make a lsst.pex.config.ConfigurableFieldfor this task.makeSubtask(name, **keyArgs)Create a subtask as a new instance as the nameattribute of this task.run(**kwargs)Run task algorithm on in-memory data. runQuantum(butlerQC, inputRefs, outputRefs)Method to do butler IO and or transforms to provide in memory objects for tasks run method timer(name, logLevel)Context manager to log performance data for an arbitrary block of code. Attributes Documentation
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canMultiprocess= True¶
Methods Documentation
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consolidate_map(sky_map, input_refs)¶ Consolidate the healsparse property maps.
Parameters: - sky_map : Sky map object
- input_refs :
dict[int:lsst.daf.butler.DeferredDatasetHandle] Dictionary of tract_id mapping to dataref.
Returns: - consolidated_map :
healsparse.HealSparseMap Consolidated HealSparse map.
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emptyMetadata() → None¶ Empty (clear) the metadata for this Task and all sub-Tasks.
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getFullMetadata() → lsst.pipe.base._task_metadata.TaskMetadata¶ Get metadata for all tasks.
Returns: - metadata :
TaskMetadata The keys are the full task name. Values are metadata for the top-level task and all subtasks, sub-subtasks, etc.
Notes
The returned metadata includes timing information (if
@timer.timeMethodis used) and any metadata set by the task. The name of each item consists of the full task name with.replaced by:, followed by.and the name of the item, e.g.:topLevelTaskName:subtaskName:subsubtaskName.itemName
using
:in the full task name disambiguates the rare situation that a task has a subtask and a metadata item with the same name.- metadata :
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getFullName() → str¶ Get the task name as a hierarchical name including parent task names.
Returns: - fullName :
str The full name consists of the name of the parent task and each subtask separated by periods. For example:
- The full name of top-level task “top” is simply “top”.
- The full name of subtask “sub” of top-level task “top” is “top.sub”.
- The full name of subtask “sub2” of subtask “sub” of top-level task “top” is “top.sub.sub2”.
- fullName :
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getResourceConfig() → Optional[ResourceConfig]¶ Return resource configuration for this task.
Returns: - Object of type
ResourceConfigorNoneif resource - configuration is not defined for this task.
- Object of type
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getTaskDict() → Dict[str, weakref.ReferenceType[lsst.pipe.base.task.Task]]¶ Get a dictionary of all tasks as a shallow copy.
Returns: - taskDict :
dict Dictionary containing full task name: task object for the top-level task and all subtasks, sub-subtasks, etc.
- taskDict :
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classmethod
makeField(doc: str) → lsst.pex.config.configurableField.ConfigurableField¶ Make a
lsst.pex.config.ConfigurableFieldfor this task.Parameters: - doc :
str Help text for the field.
Returns: - configurableField :
lsst.pex.config.ConfigurableField A
ConfigurableFieldfor this task.
Examples
Provides a convenient way to specify this task is a subtask of another task.
Here is an example of use:
class OtherTaskConfig(lsst.pex.config.Config): aSubtask = ATaskClass.makeField("brief description of task")
- doc :
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makeSubtask(name: str, **keyArgs) → None¶ Create a subtask as a new instance as the
nameattribute of this task.Parameters: - name :
str Brief name of the subtask.
- keyArgs
Extra keyword arguments used to construct the task. The following arguments are automatically provided and cannot be overridden:
- “config”.
- “parentTask”.
Notes
The subtask must be defined by
Task.config.name, an instance ofConfigurableFieldorRegistryField.- name :
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run(**kwargs) → Struct¶ Run task algorithm on in-memory data.
This method should be implemented in a subclass. This method will receive keyword arguments whose names will be the same as names of connection fields describing input dataset types. Argument values will be data objects retrieved from data butler. If a dataset type is configured with
multiplefield set toTruethen the argument value will be a list of objects, otherwise it will be a single object.If the task needs to know its input or output DataIds then it has to override
runQuantummethod instead.This method should return a
Structwhose attributes share the same name as the connection fields describing output dataset types.Returns: - struct :
Struct Struct with attribute names corresponding to output connection fields
Examples
Typical implementation of this method may look like:
def run(self, input, calib): # "input", "calib", and "output" are the names of the config # fields # Assuming that input/calib datasets are `scalar` they are # simple objects, do something with inputs and calibs, produce # output image. image = self.makeImage(input, calib) # If output dataset is `scalar` then return object, not list return Struct(output=image)
- struct :
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runQuantum(butlerQC, inputRefs, outputRefs)¶ Method to do butler IO and or transforms to provide in memory objects for tasks run method
Parameters: - butlerQC :
ButlerQuantumContext A butler which is specialized to operate in the context of a
lsst.daf.butler.Quantum.- inputRefs :
InputQuantizedConnection Datastructure whose attribute names are the names that identify connections defined in corresponding
PipelineTaskConnectionsclass. The values of these attributes are thelsst.daf.butler.DatasetRefobjects associated with the defined input/prerequisite connections.- outputRefs :
OutputQuantizedConnection Datastructure whose attribute names are the names that identify connections defined in corresponding
PipelineTaskConnectionsclass. The values of these attributes are thelsst.daf.butler.DatasetRefobjects associated with the defined output connections.
- butlerQC :
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timer(name: str, logLevel: int = 10) → Iterator[None]¶ Context manager to log performance data for an arbitrary block of code.
Parameters: See also
timer.logInfo
Examples
Creating a timer context:
with self.timer("someCodeToTime"): pass # code to time
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