Job¶
- 
class lsst.verify.Job(measurements=None, metrics=None, specs=None, meta=None)¶
- Bases: - lsst.verify.jsonmixin.JsonSerializationMixin- Container for - Measurements,- Blobs, and- Metadataassociated with a pipeline run.- Parameters: - measurements : MeasurementSetorlistofMeasurements, optional
- Measurements to report in the Job.
- metrics : listofMetrics or aMetricSet, optional
- specs : SpecificationSetorlistofSpecifications, optional
- Optional specification information. 
- meta : dict, optional
- Optional dictionary of metadata key-value entries. 
 - Attributes Summary - json- Jobdata as a JSON-serialiable- dict.- measurements- Measurements associated with the pipeline verification job ( - MeasurementSet).- meta- Metadata mapping ( - Metadata).- metrics- Metrics associated with the pipeline verification job ( - MetricSet).- specs- Specifications associated with the pipeline verifification job ( - SpecificationSet).- Methods Summary - deserialize([measurements, blobs, metrics, …])- Deserialize a Verification Framework Job from a JSON serialization. - dispatch([api_user, api_password, api_url])- POST the job to SQUASH, LSST Data Management’s metric dashboard. - jsonify_dict(d)- Recursively build JSON-renderable objects on all values in a dict. - load_metrics_package([package_name_or_path, …])- Create a Job with metrics and specifications pre-loaded from a Verification Framework metrics package, such as verify_metrics. - reload_metrics_package([…])- Load a metrics package and add metric and specification definitions to the Job, as well as the collected measurements. - report([name, spec_tags, metric_tags])- Create a verification report that lists the pass/fail status of measurements against specifications in this job. - write(filename)- Write a JSON serialization to the filesystem. - write_json(filepath)- Write JSON to a file. - Attributes Documentation - 
measurements¶
- Measurements associated with the pipeline verification job ( - MeasurementSet).
 - 
specs¶
- Specifications associated with the pipeline verifification job ( - SpecificationSet).
 - Methods Documentation - 
classmethod deserialize(measurements=None, blobs=None, metrics=None, specs=None, meta=None)¶
- Deserialize a Verification Framework Job from a JSON serialization. - Parameters: - measurements : list, optional
- List of serialized - Measurementobjects.
- blobs : list, optional
- List of serialized - Blobobjects.
- metrics : list, optional
- List of serialized - Metricobjects.
- specs : list, optional
- List of serialized specification objects. 
- meta : dict, optional
- Dictionary of key-value metadata entries. 
 - Returns: - Examples - Together, - Job.jsonand- Job.deserializeallow a verification job to be serialized and later re-instantiated.- >>> import json >>> job = Job() >>> json_str = json.dumps(job.json) >>> json_obj = json.loads(json_str) >>> new_job = Job.deserialize(**json_obj) 
- measurements : 
 - 
dispatch(api_user=None, api_password=None, api_url='https://squash-restful-api.lsst.codes', **kwargs)¶
- POST the job to SQUASH, LSST Data Management’s metric dashboard. - Parameters: - api_url : str, optional
- Root URL of the SQUASH API server. 
- api_user : str, optional
- API username. 
- api_password : str, optional
- API password. 
- **kwargs : optional
- Additional keyword arguments passed to - lsst.verify.squash.post.
 
- api_url : 
 - 
static jsonify_dict(d)¶
- Recursively build JSON-renderable objects on all values in a dict. - Parameters: - d : dict
- Dictionary to convert into a JSON-serializable object. Values are recursively JSON-ified. 
 - Returns: - json_dict : dict
- Dictionary that can be serialized to JSON. 
 - Examples - Subclasses can use this method to prepare output in their - json-method implementation. For example:- def json(self): return JsonSerializationMixin.jsonify_dict({ 'value': self.value, }) 
- d : 
 - 
classmethod load_metrics_package(package_name_or_path='verify_metrics', subset=None, measurements=None, meta=None)¶
- Create a Job with metrics and specifications pre-loaded from a Verification Framework metrics package, such as verify_metrics. - Parameters: - package_name_or_path : str, optional
- Name of an EUPS package that hosts metric and specification definition YAML files or the file path to a metrics package. - 'verify_metrics'is the default package, and is where metrics and specifications are defined for most LSST Science Pipelines packages.
- subset : str, optional
- If set, only metrics and specification for this package are loaded. For example, if - subset='validate_drp', only- validate_drpmetrics are loaded. This argument is equivalent to the- MetricSet.subsetmethod. Default is- None.
- measurements : MeasurementSetorlistofMeasurements, optional
- Measurements to report in the Job. 
- meta : dict, optional
- Optional dictionary of metadata key-value entries to include in the Job. 
 - Returns: 
- package_name_or_path : 
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reload_metrics_package(package_name_or_path='verify_metrics', subset=None)¶
- Load a metrics package and add metric and specification definitions to the Job, as well as the collected measurements. - Parameters: - package_name_or_path : str, optional
- Name of an EUPS package that hosts metric and specification definition YAML files or the file path to a metrics package. - 'verify_metrics'is the default package, and is where metrics and specifications are defined for most packages.
- subset : str, optional
- If set, only metrics and specification for this package are loaded. For example, if - subset='validate_drp', only- validate_drpmetrics are included in the- MetricSet. This argument is equivalent to the- MetricSet.subsetmethod. Default is- None.
 - Notes - This method is useful for loading metric and specification definitions into a job that was created without this information. In addition to being added to - Job.metrics, metrics are also attached to- Job.measurementsitems. This ensures that measurement values are normalized into the units of the metric definition when a Job is serialized.
- package_name_or_path : 
 - 
report(name=None, spec_tags=None, metric_tags=None)¶
- Create a verification report that lists the pass/fail status of measurements against specifications in this job. - In a Jupyter notebook, this report can be shown as an inline table. - Parameters: - name : strorlsst.verify.Name, optional
- A package or metric name to subset specifications by. When set, only measurement and specification combinations belonging to that package or metric are included in the report. 
- spec_tags : sequence of str, optional
- A set of specification tag strings. when given, only specifications that have all the given tags are included in the report. For example, - spec_tags=['LPM-17', 'minimum'].
- metric_tags : sequence of str, optional
- A set of metric tag strings. When given, only specifications belonging to metrics that posess all given tags are included in the report. For example, - metric_tags=['LPM-17', 'photometry']selects sepifications that have both the- 'LPM-17'and- 'photometry'tags.
 - Returns: - report : lsst.verify.Report
- Report instance. In a Jupyter notebook, you can view the report by calling - Report.show.
 - See also - Notes - This method uses the - lsst.verify.SpecificationSet.reportAPI to create the- lsst.verify.Report, automatically inserting the- Job’s measurements and metadata for filtering specifiation tests.- In a Jupyter notebook environment, use the - lsst.verify.Report.showmethod to view an interactive HTML table.- job = lsst.verify.Job() # ... report = job.report() report.show() 
- name : 
 - 
write(filename)¶
- Write a JSON serialization to the filesystem. - Parameters: - filename : str
- Name of the JSON file (including directories). This name should be unique among all task executions in a pipeline. The recommended extension is - '.verify.json'. This convention is used by post-processing tools to discover verification framework outputs.
 
- filename : 
 
- measurements :