IsrStatisticsTask¶

class lsst.ip.isr.IsrStatisticsTask(statControl=None, **kwargs)¶

Bases: lsst.pipe.base.Task

Task to measure arbitrary statistics on ISR processed exposures.

The goal is to wrap a number of optional measurements that are useful for calibration production and detector stability.

Methods Summary

`emptyMetadata`()	Empty (clear) the metadata for this Task and all sub-Tasks.
`getAllSchemaCatalogs`()	Get schema catalogs for all tasks in the hierarchy, combining the results into a single dict.
`getFullMetadata`()	Get metadata for all tasks.
`getFullName`()	Get the task name as a hierarchical name including parent task names.
`getName`()	Get the name of the task.
`getSchemaCatalogs`()	Get the schemas generated by this task.
`getTaskDict`()	Get a dictionary of all tasks as a shallow copy.
`makeField`(doc)	Make a `lsst.pex.config.ConfigurableField` for this task.
`makeSubtask`(name, **keyArgs)	Create a subtask as a new instance as the `name` attribute of this task.
`measureCti`(inputExp, overscans, gains)	Task to measure CTI statistics.
`run`(inputExp[, ptc, overscanResults])	Task to run arbitrary statistics.
`timer`(name, logLevel)	Context manager to log performance data for an arbitrary block of code.

Methods Documentation

emptyMetadata() → None¶: Empty (clear) the metadata for this Task and all sub-Tasks.

getAllSchemaCatalogs() → Dict[str, Any]¶

Get schema catalogs for all tasks in the hierarchy, combining the results into a single dict.

Returns:	schemacatalogs : `dict` Keys are butler dataset type, values are a empty catalog (an instance of the appropriate `lsst.afw.table` Catalog type) for all tasks in the hierarchy, from the top-level task down through all subtasks.

Notes

This method may be called on any task in the hierarchy; it will return the same answer, regardless.

The default implementation should always suffice. If your subtask uses schemas the override Task.getSchemaCatalogs, not this method.

getFullMetadata() → lsst.pipe.base._task_metadata.TaskMetadata¶

Get metadata for all tasks.

Returns:	metadata : `TaskMetadata` The keys are the full task name. Values are metadata for the top-level task and all subtasks, sub-subtasks, etc.

Notes

The returned metadata includes timing information (if @timer.timeMethod is used) and any metadata set by the task. The name of each item consists of the full task name with . replaced by :, followed by . and the name of the item, e.g.:

topLevelTaskName:subtaskName:subsubtaskName.itemName

using : in the full task name disambiguates the rare situation that a task has a subtask and a metadata item with the same name.

getFullName() → str¶

Get the task name as a hierarchical name including parent task names.

Returns:	fullName : `str` The full name consists of the name of the parent task and each subtask separated by periods. For example: The full name of top-level task “top” is simply “top”. The full name of subtask “sub” of top-level task “top” is “top.sub”. The full name of subtask “sub2” of subtask “sub” of top-level task “top” is “top.sub.sub2”.

getName() → str¶

Get the name of the task.

Returns:	taskName : `str` Name of the task.

See also

Task.getAllSchemaCatalogs

Notes

Warning

Subclasses that use schemas must override this method. The default implementation returns an empty dict.

This method may be called at any time after the Task is constructed, which means that all task schemas should be computed at construction time, not when data is actually processed. This reflects the philosophy that the schema should not depend on the data.

Returning catalogs rather than just schemas allows us to save e.g. slots for SourceCatalog as well.

getTaskDict() → Dict[str, weakref]¶

Get a dictionary of all tasks as a shallow copy.

Returns:	taskDict : `dict` Dictionary containing full task name: task object for the top-level task and all subtasks, sub-subtasks, etc.

classmethod makeField(doc: str) → lsst.pex.config.configurableField.ConfigurableField¶

Make a lsst.pex.config.ConfigurableField for this task.

Parameters:	doc : `str` Help text for the field.
Returns:	configurableField : `lsst.pex.config.ConfigurableField` A `ConfigurableField` for this task.

Examples

Provides a convenient way to specify this task is a subtask of another task.

Here is an example of use:

class OtherTaskConfig(lsst.pex.config.Config):
    aSubtask = ATaskClass.makeField("brief description of task")

makeSubtask(name: str, **keyArgs) → None¶

Create a subtask as a new instance as the name attribute of this task.

Parameters:	name : `str` Brief name of the subtask. keyArgs Extra keyword arguments used to construct the task. The following arguments are automatically provided and cannot be overridden: “config”. “parentTask”.

Notes

The subtask must be defined by Task.config.name, an instance of ConfigurableField or RegistryField.

measureCti(inputExp, overscans, gains)¶

Task to measure CTI statistics.

Parameters:

inputExp : lsst.afw.image.Exposure

Exposure to measure.

overscans : list [lsst.pipe.base.Struct]

List of overscan results. Expected fields are:

imageFit: Value or fit subtracted from the amplifier image data (scalar or lsst.afw.image.Image).
overscanFit: Value or fit subtracted from the overscan image data (scalar or lsst.afw.image.Image).
overscanImage: Image of the overscan region with the overscan correction applied (lsst.afw.image.Image). This quantity is used to estimate the amplifier read noise empirically.

gains : dict [str float]

Dictionary of per-amplifier gains, indexed by amplifier name.

Returns:

outputStats : dict [str, [dict [str,`float]]: Dictionary of measurements, keyed by amplifier name and statistics segment.

run(inputExp, ptc=None, overscanResults=None, **kwargs)¶

Task to run arbitrary statistics.

The statistics should be measured by individual methods, and add to the dictionary in the return struct.

Parameters:	inputExp : `lsst.afw.image.Exposure` The exposure to measure. ptc : `lsst.ip.isr.PtcDataset`, optional A PTC object containing gains to use. overscanResults : `list` [`lsst.pipe.base.Struct`], optional List of overscan results. Expected fields are: `imageFit` Value or fit subtracted from the amplifier image data (scalar or `lsst.afw.image.Image`). `overscanFit` Value or fit subtracted from the overscan image data (scalar or `lsst.afw.image.Image`). `overscanImage` Image of the overscan region with the overscan correction applied (`lsst.afw.image.Image`). This quantity is used to estimate the amplifier read noise empirically.
Returns:	resultStruct : `lsst.pipe.base.Struct` Contains the measured statistics as a dict stored in a field named `results`.
Raises:	RuntimeError Raised if the amplifier gains could not be found.

timer(name: str, logLevel: int = 10) → Iterator[None]¶

Context manager to log performance data for an arbitrary block of code.

Parameters:	name : `str` Name of code being timed; data will be logged using item name: `Start` and `End`. logLevel A `logging` level constant.

Navigation

IsrStatisticsTask¶