ZogyImagePsfMatchTask¶
-
class
lsst.ip.diffim.
ZogyImagePsfMatchTask
(*args, **kwargs)¶ Bases:
lsst.ip.diffim.ImagePsfMatchTask
Task to perform Zogy PSF matching and image subtraction.
This class inherits from ImagePsfMatchTask to contain the _warper subtask and related methods.
Methods Summary
emptyMetadata
()Empty (clear) the metadata for this Task and all sub-Tasks. getFullMetadata
()Get metadata for all tasks. getFullName
()Get the task name as a hierarchical name including parent task names. getName
()Get the name of the task. getSelectSources
(exposure[, sigma, …])Get sources to use for Psf-matching. getTaskDict
()Get a dictionary of all tasks as a shallow copy. makeCandidateList
(templateExposure, …[, …])Make a list of acceptable KernelCandidates. makeField
(doc)Make a lsst.pex.config.ConfigurableField
for this task.makeKernelBasisList
([targetFwhmPix, …])Wrapper to set log messages for lsst.ip.diffim.makeKernelBasisList
.makeSubtask
(name, **keyArgs)Create a subtask as a new instance as the name
attribute of this task.matchExposures
(templateExposure, scienceExposure)Warp and PSF-match an exposure to the reference. matchMaskedImages
(templateMaskedImage, …)PSF-match a MaskedImage (templateMaskedImage) to a reference MaskedImage (scienceMaskedImage). run
(scienceExposure, templateExposure[, …])Register, PSF-match, and subtract two Exposures, scienceExposure - templateExposure
using the ZOGY algorithm.subtractExposures
(templateExposure, …)Register, Psf-match and subtract two Exposures. subtractMaskedImages
(templateExposure, …)Psf-match and subtract two MaskedImages. timer
(name, logLevel)Context manager to log performance data for an arbitrary block of code. Methods Documentation
-
emptyMetadata
() → None¶ Empty (clear) the metadata for this Task and all sub-Tasks.
-
getFullMetadata
() → lsst.pipe.base._task_metadata.TaskMetadata¶ Get metadata for all tasks.
Returns: - metadata :
TaskMetadata
The keys are the full task name. Values are metadata for the top-level task and all subtasks, sub-subtasks, etc.
Notes
The returned metadata includes timing information (if
@timer.timeMethod
is used) and any metadata set by the task. The name of each item consists of the full task name with.
replaced by:
, followed by.
and the name of the item, e.g.:topLevelTaskName:subtaskName:subsubtaskName.itemName
using
:
in the full task name disambiguates the rare situation that a task has a subtask and a metadata item with the same name.- metadata :
-
getFullName
() → str¶ Get the task name as a hierarchical name including parent task names.
Returns: - fullName :
str
The full name consists of the name of the parent task and each subtask separated by periods. For example:
- The full name of top-level task “top” is simply “top”.
- The full name of subtask “sub” of top-level task “top” is “top.sub”.
- The full name of subtask “sub2” of subtask “sub” of top-level task “top” is “top.sub.sub2”.
- fullName :
-
getSelectSources
(exposure, sigma=None, doSmooth=True, idFactory=None)¶ Get sources to use for Psf-matching.
This method runs detection and measurement on an exposure. The returned set of sources will be used as candidates for Psf-matching.
Parameters: Returns: - selectSources :
source catalog containing candidates for the Psf-matching
-
getTaskDict
() → Dict[str, weakref.ReferenceType[lsst.pipe.base.task.Task]]¶ Get a dictionary of all tasks as a shallow copy.
Returns: - taskDict :
dict
Dictionary containing full task name: task object for the top-level task and all subtasks, sub-subtasks, etc.
- taskDict :
-
makeCandidateList
(templateExposure, scienceExposure, kernelSize, candidateList=None)¶ Make a list of acceptable KernelCandidates.
Accept or generate a list of candidate sources for Psf-matching, and examine the Mask planes in both of the images for indications of bad pixels
Parameters: - templateExposure :
lsst.afw.image.Exposure
Exposure that will be convolved
- scienceExposure :
lsst.afw.image.Exposure
Exposure that will be matched-to
- kernelSize :
float
Dimensions of the Psf-matching Kernel, used to grow detection footprints
- candidateList :
list
, optional List of Sources to examine. Elements must be of type afw.table.Source or a type that wraps a Source and has a getSource() method, such as meas.algorithms.PsfCandidateF.
Returns: - templateExposure :
-
classmethod
makeField
(doc: str) → lsst.pex.config.configurableField.ConfigurableField¶ Make a
lsst.pex.config.ConfigurableField
for this task.Parameters: - doc :
str
Help text for the field.
Returns: - configurableField :
lsst.pex.config.ConfigurableField
A
ConfigurableField
for this task.
Examples
Provides a convenient way to specify this task is a subtask of another task.
Here is an example of use:
class OtherTaskConfig(lsst.pex.config.Config): aSubtask = ATaskClass.makeField("brief description of task")
- doc :
-
makeKernelBasisList
(targetFwhmPix=None, referenceFwhmPix=None, basisDegGauss=None, basisSigmaGauss=None, metadata=None)¶ Wrapper to set log messages for
lsst.ip.diffim.makeKernelBasisList
.Parameters: - targetFwhmPix :
float
, optional Passed on to
lsst.ip.diffim.generateAlardLuptonBasisList
. Not used for delta function basis sets.- referenceFwhmPix :
float
, optional Passed on to
lsst.ip.diffim.generateAlardLuptonBasisList
. Not used for delta function basis sets.- basisDegGauss :
list
ofint
, optional Passed on to
lsst.ip.diffim.generateAlardLuptonBasisList
. Not used for delta function basis sets.- basisSigmaGauss :
list
ofint
, optional Passed on to
lsst.ip.diffim.generateAlardLuptonBasisList
. Not used for delta function basis sets.- metadata :
lsst.daf.base.PropertySet
, optional Passed on to
lsst.ip.diffim.generateAlardLuptonBasisList
. Not used for delta function basis sets.
Returns: - basisList:
list
oflsst.afw.math.kernel.FixedKernel
List of basis kernels.
- targetFwhmPix :
-
makeSubtask
(name: str, **keyArgs) → None¶ Create a subtask as a new instance as the
name
attribute of this task.Parameters: - name :
str
Brief name of the subtask.
- keyArgs
Extra keyword arguments used to construct the task. The following arguments are automatically provided and cannot be overridden:
- “config”.
- “parentTask”.
Notes
The subtask must be defined by
Task.config.name
, an instance ofConfigurableField
orRegistryField
.- name :
-
matchExposures
(templateExposure, scienceExposure, templateFwhmPix=None, scienceFwhmPix=None, candidateList=None, doWarping=True, convolveTemplate=True)¶ Warp and PSF-match an exposure to the reference.
Do the following, in order:
- Warp templateExposure to match scienceExposure,
- if doWarping True and their WCSs do not already match
- Determine a PSF matching kernel and differential background model
- that matches templateExposure to scienceExposure
- Convolve templateExposure by PSF matching kernel
Parameters: - templateExposure :
lsst.afw.image.Exposure
Exposure to warp and PSF-match to the reference masked image
- scienceExposure :
lsst.afw.image.Exposure
Exposure whose WCS and PSF are to be matched to
- templateFwhmPix :
float
FWHM (in pixels) of the Psf in the template image (image to convolve)
- scienceFwhmPix :
float
FWHM (in pixels) of the Psf in the science image
- candidateList :
list
, optional a list of footprints/maskedImages for kernel candidates; if
None
then source detection is run.- Currently supported: list of Footprints or measAlg.PsfCandidateF
- doWarping :
bool
what to do if
templateExposure
andscienceExposure
WCSs do not match:- convolveTemplate :
bool
Whether to convolve the template image or the science image:
Returns: - results :
lsst.pipe.base.Struct
An
lsst.pipe.base.Struct
containing these fields:matchedImage
: the PSF-matched exposure =- Warped
templateExposure
convolved by psfMatchingKernel. This has:- the same parent bbox, Wcs and PhotoCalib as scienceExposure
- the same filter as templateExposure
- no Psf (because the PSF-matching process does not compute one)
psfMatchingKernel
: the PSF matching kernelbackgroundModel
: differential background modelkernelCellSet
: SpatialCellSet used to solve for the PSF matching kernel
Raises: - RuntimeError
Raised if doWarping is False and
templateExposure
andscienceExposure
WCSs do not match
-
matchMaskedImages
(templateMaskedImage, scienceMaskedImage, candidateList, templateFwhmPix=None, scienceFwhmPix=None)¶ PSF-match a MaskedImage (templateMaskedImage) to a reference MaskedImage (scienceMaskedImage).
Do the following, in order:
- Determine a PSF matching kernel and differential background model
- that matches templateMaskedImage to scienceMaskedImage
- Convolve templateMaskedImage by the PSF matching kernel
Parameters: - templateMaskedImage :
lsst.afw.image.MaskedImage
masked image to PSF-match to the reference masked image; must be warped to match the reference masked image
- scienceMaskedImage :
lsst.afw.image.MaskedImage
maskedImage whose PSF is to be matched to
- templateFwhmPix :
float
FWHM (in pixels) of the Psf in the template image (image to convolve)
- scienceFwhmPix :
float
FWHM (in pixels) of the Psf in the science image
- candidateList :
list
, optional A list of footprints/maskedImages for kernel candidates; if
None
then source detection is run.- Currently supported: list of Footprints or measAlg.PsfCandidateF
Returns: - result :
callable
- An
lsst.pipe.base.Struct
containing these fields:
- psfMatchedMaskedImage: the PSF-matched masked image =
templateMaskedImage
convolved with psfMatchingKernel. This has the same xy0, dimensions and wcs asscienceMaskedImage
.
- psfMatchingKernel: the PSF matching kernel
- backgroundModel: differential background model
- kernelCellSet: SpatialCellSet used to solve for the PSF matching kernel
Raises: - RuntimeError
Raised if input images have different dimensions
-
run
(scienceExposure, templateExposure, doWarping=True)¶ Register, PSF-match, and subtract two Exposures,
scienceExposure - templateExposure
using the ZOGY algorithm.Parameters: - templateExposure :
lsst.afw.image.Exposure
exposure to be warped to scienceExposure.
- scienceExposure :
lsst.afw.image.Exposure
reference Exposure.
- doWarping :
bool
what to do if templateExposure’s and scienceExposure’s WCSs do not match: - if True then warp templateExposure to match scienceExposure - if False then raise an Exception
Returns: - results :
lsst.pipe.base.Struct
containing these fields: - subtractedExposure:
lsst.afw.image.Exposure
- The subtraction result.
- subtractedExposure:
- warpedExposure:
lsst.afw.image.Exposure
orNone
- templateExposure after warping to match scienceExposure
- warpedExposure:
Notes
- Do the following, in order:
- Warp templateExposure to match scienceExposure, if their WCSs do not already match
- Compute subtracted exposure ZOGY image subtraction algorithm on the two exposures
This is the new entry point of the task as of DM-25115.
- templateExposure :
-
subtractExposures
(templateExposure, scienceExposure, *args)¶ Register, Psf-match and subtract two Exposures.
Do the following, in order:
- Warp templateExposure to match scienceExposure, if their WCSs do not already match
- Determine a PSF matching kernel and differential background model
- that matches templateExposure to scienceExposure
- PSF-match templateExposure to scienceExposure
- Compute subtracted exposure (see return values for equation).
Parameters: - templateExposure :
lsst.afw.image.ExposureF
Exposure to PSF-match to scienceExposure
- scienceExposure :
lsst.afw.image.ExposureF
Reference Exposure
- templateFwhmPix :
float
FWHM (in pixels) of the Psf in the template image (image to convolve)
- scienceFwhmPix :
float
FWHM (in pixels) of the Psf in the science image
- candidateList :
list
, optional A list of footprints/maskedImages for kernel candidates; if
None
then source detection is run.- Currently supported: list of Footprints or measAlg.PsfCandidateF
- doWarping :
bool
What to do if
templateExposure`
andscienceExposure
WCSs do not match:- convolveTemplate :
bool
Convolve the template image or the science image
Returns: - result :
lsst.pipe.base.Struct
An
lsst.pipe.base.Struct
containing these fields:subtractedExposure
: subtracted ExposurescienceExposure - (matchedImage + backgroundModel)
matchedImage
:templateExposure
after warping to matchtemplateExposure
(if doWarping true), and convolving with psfMatchingKernel
psfMatchingKernel
: PSF matching kernelbackgroundModel
: differential background modelkernelCellSet
: SpatialCellSet used to determine PSF matching kernel
-
subtractMaskedImages
(templateExposure, scienceExposure, *args)¶ Psf-match and subtract two MaskedImages.
Do the following, in order:
- PSF-match templateMaskedImage to scienceMaskedImage
- Determine the differential background
- Return the difference: scienceMaskedImage
- ((warped templateMaskedImage convolved with psfMatchingKernel) + backgroundModel)
Parameters: - templateMaskedImage :
lsst.afw.image.MaskedImage
MaskedImage to PSF-match to
scienceMaskedImage
- scienceMaskedImage :
lsst.afw.image.MaskedImage
Reference MaskedImage
- templateFwhmPix :
float
FWHM (in pixels) of the Psf in the template image (image to convolve)
- scienceFwhmPix :
float
FWHM (in pixels) of the Psf in the science image
- candidateList :
list
, optional A list of footprints/maskedImages for kernel candidates; if
None
then source detection is run.- Currently supported: list of Footprints or measAlg.PsfCandidateF
Returns: - results :
lsst.pipe.base.Struct
An
lsst.pipe.base.Struct
containing these fields:subtractedMaskedImage
:scienceMaskedImage
- (matchedImage + backgroundModel)matchedImage
: templateMaskedImage convolved with psfMatchingKernelpsfMatchingKernel`
: PSF matching kernelbackgroundModel
: differential background modelkernelCellSet
: SpatialCellSet used to determine PSF matching kernel
-
timer
(name: str, logLevel: int = 10) → Iterator[None]¶ Context manager to log performance data for an arbitrary block of code.
Parameters: See also
timer.logInfo
Examples
Creating a timer context:
with self.timer("someCodeToTime"): pass # code to time
-