SubtractBackgroundTask¶
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class
lsst.meas.algorithms.
SubtractBackgroundTask
(config: Optional[Config] = None, name: Optional[str] = None, parentTask: Optional[Task] = None, log: Optional[Union[logging.Logger, lsst.utils.logging.LsstLogAdapter]] = None)¶ Bases:
lsst.pipe.base.Task
Subtract the background from an exposure
Methods Summary
emptyMetadata
()Empty (clear) the metadata for this Task and all sub-Tasks. fitBackground
(maskedImage[, nx, ny, algorithm])Estimate the background of a masked image getFullMetadata
()Get metadata for all tasks. getFullName
()Get the task name as a hierarchical name including parent task names. getName
()Get the name of the task. getTaskDict
()Get a dictionary of all tasks as a shallow copy. makeField
(doc)Make a lsst.pex.config.ConfigurableField
for this task.makeSubtask
(name, **keyArgs)Create a subtask as a new instance as the name
attribute of this task.run
(exposure[, background, stats, statsKeys])Fit and subtract the background of an exposure. timer
(name, logLevel)Context manager to log performance data for an arbitrary block of code. Methods Documentation
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emptyMetadata
() → None¶ Empty (clear) the metadata for this Task and all sub-Tasks.
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fitBackground
(maskedImage, nx=0, ny=0, algorithm=None)¶ Estimate the background of a masked image
Parameters: - maskedImage :
lsst.afw.image.maskedImage
Masked image whose background is to be computed
- nx : ‘int`
Number of x bands; if 0 compute from width and
self.config.binSizeX
- ny :
int
Number of y bands; if 0 compute from height and
self.config.binSizeY
- algorithm :
str
Name of interpolation algorithm; if None use
self.config.algorithm
Returns: - bg :
lsst.afw.math.Background
A fit background
Raises: - RuntimeError
Raised if lsst.afw.math.makeBackground returns None, an indicator of failure.
- maskedImage :
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getFullMetadata
() → lsst.pipe.base._task_metadata.TaskMetadata¶ Get metadata for all tasks.
Returns: - metadata :
TaskMetadata
The keys are the full task name. Values are metadata for the top-level task and all subtasks, sub-subtasks, etc.
Notes
The returned metadata includes timing information (if
@timer.timeMethod
is used) and any metadata set by the task. The name of each item consists of the full task name with.
replaced by:
, followed by.
and the name of the item, e.g.:topLevelTaskName:subtaskName:subsubtaskName.itemName
using
:
in the full task name disambiguates the rare situation that a task has a subtask and a metadata item with the same name.- metadata :
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getFullName
() → str¶ Get the task name as a hierarchical name including parent task names.
Returns: - fullName :
str
The full name consists of the name of the parent task and each subtask separated by periods. For example:
- The full name of top-level task “top” is simply “top”.
- The full name of subtask “sub” of top-level task “top” is “top.sub”.
- The full name of subtask “sub2” of subtask “sub” of top-level task “top” is “top.sub.sub2”.
- fullName :
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getTaskDict
() → Dict[str, weakref.ReferenceType[lsst.pipe.base.task.Task]]¶ Get a dictionary of all tasks as a shallow copy.
Returns: - taskDict :
dict
Dictionary containing full task name: task object for the top-level task and all subtasks, sub-subtasks, etc.
- taskDict :
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classmethod
makeField
(doc: str) → lsst.pex.config.configurableField.ConfigurableField¶ Make a
lsst.pex.config.ConfigurableField
for this task.Parameters: - doc :
str
Help text for the field.
Returns: - configurableField :
lsst.pex.config.ConfigurableField
A
ConfigurableField
for this task.
Examples
Provides a convenient way to specify this task is a subtask of another task.
Here is an example of use:
class OtherTaskConfig(lsst.pex.config.Config): aSubtask = ATaskClass.makeField("brief description of task")
- doc :
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makeSubtask
(name: str, **keyArgs) → None¶ Create a subtask as a new instance as the
name
attribute of this task.Parameters: - name :
str
Brief name of the subtask.
- keyArgs
Extra keyword arguments used to construct the task. The following arguments are automatically provided and cannot be overridden:
- “config”.
- “parentTask”.
Notes
The subtask must be defined by
Task.config.name
, an instance ofConfigurableField
orRegistryField
.- name :
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run
(exposure, background=None, stats=True, statsKeys=None)¶ Fit and subtract the background of an exposure.
Parameters: - exposure :
lsst.afw.image.Exposure
Exposure whose background is to be subtracted.
- background :
lsst.afw.math.BackgroundList
Initial background model already subtracted. May be None if no background has been subtracted.
- stats :
bool
If True then measure the mean and variance of the full background model and record the results in the exposure’s metadata.
- statsKeys :
tuple
Key names used to store the mean and variance of the background in the exposure’s metadata (another tuple); if None then use (“BGMEAN”, “BGVAR”); ignored if stats is false.
Returns: - background :
lsst.afw.math.BackgroundLst
Full background model (initial model with changes), contained in an
lsst.pipe.base.Struct
.
- exposure :
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timer
(name: str, logLevel: int = 10) → Iterator[None]¶ Context manager to log performance data for an arbitrary block of code.
Parameters: See also
timer.logInfo
Examples
Creating a timer context:
with self.timer("someCodeToTime"): pass # code to time
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