AssembleCcdTask

class lsst.ip.isr.AssembleCcdTask(**kwargs)

Bases: Task

Assemble a set of amplifier images into a full detector size set of pixels.

The keys for removal specified in lsst.ip.isr.AssembleCcdConfig.keysToRemove are added to a default set: (‘DATASEC’, ‘BIASSEC’, ‘TRIMSEC’, ‘GAIN’).

Methods Summary

assembleCcd(assembleInput)

Assemble a set of amps into a single CCD size image.

emptyMetadata()

Empty (clear) the metadata for this Task and all sub-Tasks.

getFullMetadata()

Get metadata for all tasks.

getFullName()

Get the task name as a hierarchical name including parent task names.

getName()

Get the name of the task.

getTaskDict()

Get a dictionary of all tasks as a shallow copy.

makeField(doc)

Make a lsst.pex.config.ConfigurableField for this task.

makeSubtask(name, **keyArgs)

Create a subtask as a new instance as the name attribute of this task.

postprocessExposure(outExposure, inExposure)

Set exposure non-image attributes, including wcs and metadata and display exposure (if requested).

timer(name[, logLevel])

Context manager to log performance data for an arbitrary block of code.

Methods Documentation

assembleCcd(assembleInput)

Assemble a set of amps into a single CCD size image.

Parameters:
assembleInputdict [str, lsst.afw.image.Exposure] or lsst.afw.image.Exposure

Either a dictionary of amp exposures, or a single exposure containing all raw amps. If a dictionary of amp exposures, the key should be the amp name.

Returns:
assembledCcdlsst.afw.image.Exposure

An exposure of the assembled amp sections.

Raises:
TypeError

Raised if the input exposures to be assembled do not adhere to the required format.

RuntimeError

Raised if the detector set on the input exposure is not set.

emptyMetadata() → None

Empty (clear) the metadata for this Task and all sub-Tasks.

getFullMetadata() → TaskMetadata

Get metadata for all tasks.

Returns:
metadataTaskMetadata

The keys are the full task name. Values are metadata for the top-level task and all subtasks, sub-subtasks, etc.

Notes

The returned metadata includes timing information (if @timer.timeMethod is used) and any metadata set by the task. The name of each item consists of the full task name with . replaced by :, followed by . and the name of the item, e.g.:

topLevelTaskName:subtaskName:subsubtaskName.itemName

using : in the full task name disambiguates the rare situation that a task has a subtask and a metadata item with the same name.

getFullName() → str

Get the task name as a hierarchical name including parent task names.

Returns:
fullNamestr

The full name consists of the name of the parent task and each subtask separated by periods. For example:

  • The full name of top-level task “top” is simply “top”.

  • The full name of subtask “sub” of top-level task “top” is “top.sub”.

  • The full name of subtask “sub2” of subtask “sub” of top-level task “top” is “top.sub.sub2”.

getName() → str

Get the name of the task.

Returns:
taskNamestr

Name of the task.

See also

getFullName

Get the full name of the task.

getTaskDict() → dict[str, weakref.ReferenceType[lsst.pipe.base.task.Task]]

Get a dictionary of all tasks as a shallow copy.

Returns:
taskDictdict

Dictionary containing full task name: task object for the top-level task and all subtasks, sub-subtasks, etc.

classmethod makeField(doc: str) → ConfigurableField

Make a lsst.pex.config.ConfigurableField for this task.

Parameters:
docstr

Help text for the field.

Returns:
configurableFieldlsst.pex.config.ConfigurableField

A ConfigurableField for this task.

Examples

Provides a convenient way to specify this task is a subtask of another task.

Here is an example of use:

class OtherTaskConfig(lsst.pex.config.Config):
    aSubtask = ATaskClass.makeField("brief description of task")
makeSubtask(name: str, **keyArgs: Any) → None

Create a subtask as a new instance as the name attribute of this task.

Parameters:
namestr

Brief name of the subtask.

**keyArgs

Extra keyword arguments used to construct the task. The following arguments are automatically provided and cannot be overridden:

  • config.

  • parentTask.

Notes

The subtask must be defined by Task.config.name, an instance of ConfigurableField or RegistryField.

postprocessExposure(outExposure, inExposure)

Set exposure non-image attributes, including wcs and metadata and display exposure (if requested).

Call after assembling the pixels.

Parameters:
outExposurelsst.afw.image.Exposure

The exposure to modify by copying metadata (after removing unwanted keywords), wcs, filter, and detector from inExposure.

inExposurelsst.afw.image.Exposure

The input exposure providing metadata, wcs, filter, and detector.

timer(name: str, logLevel: int = 10) → Iterator[None]

Context manager to log performance data for an arbitrary block of code.

Parameters:
namestr

Name of code being timed; data will be logged using item name: Start and End.

logLevelint

A logging level constant.

See also

lsst.utils.timer.logInfo

Implementation function.

Examples

Creating a timer context:

with self.timer("someCodeToTime"):
    pass  # code to time