ScarletDeblendTask¶

class lsst.meas.extensions.scarlet.ScarletDeblendTask(schema, peakSchema=None, **kwargs)¶

Bases: Task

Split blended sources into individual sources.

This task has no return value; it only modifies the SourceCatalog in-place.

Methods Summary

`deblend`(mExposure, catalog)	Deblend a data cube of multiband images
`emptyMetadata`()	Empty (clear) the metadata for this Task and all sub-Tasks.
`getAllSchemaCatalogs`()	Get schema catalogs for all tasks in the hierarchy, combining the results into a single dict.
`getFullMetadata`()	Get metadata for all tasks.
`getFullName`()	Get the task name as a hierarchical name including parent task names.
`getName`()	Get the name of the task.
`getSchemaCatalogs`()	Get the schemas generated by this task.
`getTaskDict`()	Get a dictionary of all tasks as a shallow copy.
`makeField`(doc)	Make a `lsst.pex.config.ConfigurableField` for this task.
`makeSubtask`(name, **keyArgs)	Create a subtask as a new instance as the `name` attribute of this task.
`run`(mExposure, mergedSources)	Get the psf from each exposure and then run deblend().
`setSkipFlags`(mExposure, catalog)	Set the skip flags for all of the parent sources
`timer`(name[, logLevel])	Context manager to log performance data for an arbitrary block of code.

Methods Documentation

deblend(mExposure, catalog)¶

Deblend a data cube of multiband images

Parameters:

mExposureMultibandExposure: The exposures should be co-added images of the same shape and region of the sky.
catalogSourceCatalog: The merged SourceCatalog that contains parent footprints to (potentially) deblend. The new deblended sources are appended to this catalog in place.

Returns:

catalogsdict or None: Keys are the names of the filters and the values are lsst.afw.table.source.source.SourceCatalog’s. These are catalogs with heavy footprints that are the templates created by the multiband templates.

emptyMetadata() → None¶: Empty (clear) the metadata for this Task and all sub-Tasks.

getAllSchemaCatalogs() → Dict[str, Any]¶

Get schema catalogs for all tasks in the hierarchy, combining the results into a single dict.

Returns:

schemacatalogsdict: Keys are butler dataset type, values are a empty catalog (an instance of the appropriate lsst.afw.table Catalog type) for all tasks in the hierarchy, from the top-level task down through all subtasks.

Notes

This method may be called on any task in the hierarchy; it will return the same answer, regardless.

The default implementation should always suffice. If your subtask uses schemas the override Task.getSchemaCatalogs, not this method.

getFullMetadata() → TaskMetadata¶

Get metadata for all tasks.

Returns:

metadataTaskMetadata: The keys are the full task name. Values are metadata for the top-level task and all subtasks, sub-subtasks, etc.

Notes

The returned metadata includes timing information (if @timer.timeMethod is used) and any metadata set by the task. The name of each item consists of the full task name with . replaced by :, followed by . and the name of the item, e.g.:

topLevelTaskName:subtaskName:subsubtaskName.itemName

using : in the full task name disambiguates the rare situation that a task has a subtask and a metadata item with the same name.

getFullName() → str¶

Get the task name as a hierarchical name including parent task names.

Returns:

fullNamestr

The full name consists of the name of the parent task and each subtask separated by periods. For example:

The full name of top-level task “top” is simply “top”.
The full name of subtask “sub” of top-level task “top” is “top.sub”.
The full name of subtask “sub2” of subtask “sub” of top-level task “top” is “top.sub.sub2”.

getName() → str¶

Get the name of the task.

Returns:

taskNamestr: Name of the task.

See also

Task.getAllSchemaCatalogs

Notes

Warning

Subclasses that use schemas must override this method. The default implementation returns an empty dict.

This method may be called at any time after the Task is constructed, which means that all task schemas should be computed at construction time, not when data is actually processed. This reflects the philosophy that the schema should not depend on the data.

Returning catalogs rather than just schemas allows us to save e.g. slots for SourceCatalog as well.

getTaskDict() → Dict[str, ReferenceType[Task]]¶

Get a dictionary of all tasks as a shallow copy.

Returns:

taskDictdict: Dictionary containing full task name: task object for the top-level task and all subtasks, sub-subtasks, etc.

classmethod makeField(doc: str) → ConfigurableField¶

Make a lsst.pex.config.ConfigurableField for this task.

Parameters:

docstr: Help text for the field.

Returns:

configurableFieldlsst.pex.config.ConfigurableField: A ConfigurableField for this task.

Examples

Provides a convenient way to specify this task is a subtask of another task.

Here is an example of use:

class OtherTaskConfig(lsst.pex.config.Config):
    aSubtask = ATaskClass.makeField("brief description of task")

makeSubtask(name: str, **keyArgs: Any) → None¶

Create a subtask as a new instance as the name attribute of this task.

Parameters:

namestr

Brief name of the subtask.

keyArgs

Extra keyword arguments used to construct the task. The following arguments are automatically provided and cannot be overridden:

“config”.
“parentTask”.

Notes

The subtask must be defined by Task.config.name, an instance of ConfigurableField or RegistryField.

run(mExposure, mergedSources)¶

Get the psf from each exposure and then run deblend().

Parameters:

mExposureMultibandExposure: The exposures should be co-added images of the same shape and region of the sky.
mergedSourcesSourceCatalog: The merged SourceCatalog that contains parent footprints to (potentially) deblend.

Returns:

templateCatalogs: dict: Keys are the names of the filters and the values are lsst.afw.table.source.source.SourceCatalog’s. These are catalogs with heavy footprints that are the templates created by the multiband templates.

setSkipFlags(mExposure, catalog)¶

Set the skip flags for all of the parent sources

This is mostly used for testing which parent sources will be deblended and which will be skipped based on the current configuration options. Skipped sources will have the appropriate flags set in place in the catalog.

Parameters:

mExposureMultibandExposure: The exposures should be co-added images of the same shape and region of the sky.
catalogSourceCatalog: The merged SourceCatalog that contains parent footprints to (potentially) deblend. The new deblended sources are appended to this catalog in place.

timer(name: str, logLevel: int = 10) → Iterator[None]¶

Context manager to log performance data for an arbitrary block of code.

Parameters:

namestr: Name of code being timed; data will be logged using item name: Start and End.
logLevel: A logging level constant.

Navigation

ScarletDeblendTask¶