MatchTractCatalogProbabilisticTask

class lsst.pipe.tasks.match_tract_catalog_probabilistic.MatchTractCatalogProbabilisticTask(**kwargs)

Bases: MatchProbabilisticTask, MatchTractCatalogSubTask

An abstract interface for subtasks of MatchTractCatalogTask to match two tract object catalogs.

Parameters:

**kwargs

Additional arguments to be passed to the lsst.pipe.base.Task constructor.

Attributes Summary

columns_in_ref
columns_in_target

Methods Summary

emptyMetadata()	Empty (clear) the metadata for this Task and all sub-Tasks.
getFullMetadata()	Get metadata for all tasks.
getFullName()	Get the task name as a hierarchical name including parent task names.
getName()	Get the name of the task.
getTaskDict()	Get a dictionary of all tasks as a shallow copy.
makeField(doc)	Make a lsst.pex.config.ConfigurableField for this task.
makeSubtask(name, **keyArgs)	Create a subtask as a new instance as the name attribute of this task.
match(catalog_ref, catalog_target[, ...])	Match sources in a reference tract catalog with a target catalog.
run(catalog_ref, catalog_target[, wcs])	Match sources in a reference tract catalog with a target catalog.
timer(name[, logLevel])	Context manager to log performance data for an arbitrary block of code.

Attributes Documentation

columns_in_ref

columns_in_target

Methods Documentation

emptyMetadata() → None

Empty (clear) the metadata for this Task and all sub-Tasks.

getFullMetadata() → TaskMetadata

Get metadata for all tasks.

Returns:

metadataTaskMetadata

The keys are the full task name. Values are metadata for the top-level task and all subtasks, sub-subtasks, etc.

Notes

The returned metadata includes timing information (if @timer.timeMethod is used) and any metadata set by the task. The name of each item consists of the full task name with . replaced by :, followed by . and the name of the item, e.g.:

topLevelTaskName:subtaskName:subsubtaskName.itemName

using : in the full task name disambiguates the rare situation that a task has a subtask and a metadata item with the same name.

getFullName() → str

Get the task name as a hierarchical name including parent task names.

Returns:

fullNamestr

The full name consists of the name of the parent task and each subtask separated by periods. For example:

• The full name of top-level task “top” is simply “top”.

• The full name of subtask “sub” of top-level task “top” is “top.sub”.

• The full name of subtask “sub2” of subtask “sub” of top-level task “top” is “top.sub.sub2”.

getName() → str

Get the name of the task.

Returns:

taskNamestr

Name of the task.

See also

getFullName

getTaskDict() → dict[str, weakref.ReferenceType[lsst.pipe.base.task.Task]]

Get a dictionary of all tasks as a shallow copy.

Returns:

taskDictdict

Dictionary containing full task name: task object for the top-level task and all subtasks, sub-subtasks, etc.

classmethod makeField(doc: str) → ConfigurableField

Make a lsst.pex.config.ConfigurableField for this task.

Parameters:

docstr

Help text for the field.

Returns:

configurableFieldlsst.pex.config.ConfigurableField

A ConfigurableField for this task.

Examples

Provides a convenient way to specify this task is a subtask of another task.

Here is an example of use:

class OtherTaskConfig(lsst.pex.config.Config):
    aSubtask = ATaskClass.makeField("brief description of task")

makeSubtask(name: str, **keyArgs: Any) → None

Create a subtask as a new instance as the name attribute of this task.

Parameters:

namestr

Brief name of the subtask.

**keyArgs

Extra keyword arguments used to construct the task. The following arguments are automatically provided and cannot be overridden:

• config.

• parentTask.

Notes

The subtask must be defined by Task.config.name, an instance of ConfigurableField or RegistryField.

match(catalog_ref: DataFrame, catalog_target: DataFrame, select_ref: array = None, select_target: array = None, wcs: SkyWcs = None, logger: Logger = None, logging_n_rows: int = None) → Tuple[DataFrame, DataFrame, Dict[int, str]]

Match sources in a reference tract catalog with a target catalog.

Parameters:

catalog_refpandas.DataFrame

A reference catalog to match objects/sources from.

catalog_targetpandas.DataFrame

A target catalog to match reference objects/sources to.

select_refnumpy.array

A boolean array of the same length as catalog_ref selecting the sources that can be matched.

select_targetnumpy.array

A boolean array of the same length as catalog_target selecting the sources that can be matched.

wcslsst.afw.image.SkyWcs

A coordinate system to convert catalog positions to sky coordinates. Only used if self.config.coords_ref_to_convert is set.

loggerlogging.Logger

A Logger for logging.

logging_n_rowsint

Number of matches to make before outputting incremental log message.

Returns:

catalog_out_refpandas.DataFrame

Reference matched catalog with indices of target matches.

catalog_out_targetpandas.DataFrame

Reference matched catalog with indices of target matches.

run(catalog_ref: DataFrame, catalog_target: DataFrame, wcs: SkyWcs = None) → Struct

Match sources in a reference tract catalog with a target catalog.

Parameters:

catalog_refpandas.DataFrame

A reference catalog to match objects/sources from.

catalog_targetpandas.DataFrame

A target catalog to match reference objects/sources to.

wcslsst.afw.image.SkyWcs

A coordinate system to convert catalog positions to sky coordinates. Only needed if config.coords_ref_to_convert is used to convert reference catalog sky coordinates to pixel positions.

Returns:

retStructlsst.pipe.base.Struct

A struct with output_ref and output_target attribute containing the output matched catalogs.

timer(name: str, logLevel: int = 10) → Iterator[None]

Context manager to log performance data for an arbitrary block of code.

Parameters:

namestr

Name of code being timed; data will be logged using item name: Start and End.

logLevel

A logging level constant.

See also

lsst.utils.timer.logInfo

Examples

Creating a timer context:

with self.timer("someCodeToTime"):
    pass  # code to time