Job¶
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class lsst.verify.Job(measurements=None, metrics=None, specs=None, meta=None)[source]¶
- Bases: - lsst.verify.jsonmixin.JsonSerializationMixin- Container for - Measurements,- Blobs, and- Metadataassociated with a pipeline run.- Parameters: - measurements : - MeasurementSetor- listof- Measurements, optional- Measurements to report in the Job.- metrics : - listof- Metrics or a- MetricSet, optional- specs : - SpecificationSetor- listof- Specifications, optional- Optional specification information. - meta : - dict, optional- Optional dictionary of metadata key-value entries. - Attributes Summary - json- Jobdata as a JSON-serialiable- dict.- measurements- Measurements associated with the pipeline verification job ( - MeasurementSet).- meta- Metadata mapping ( - Metadata).- metrics- Metrics associated with the pipeline verification job ( - MetricSet).- specs- Specifications associated with the pipeline verifification job ( - SpecificationSet).- Methods Summary - deserialize([measurements, blobs, metrics, ...])- Deserialize a Verification Framework Job from a JSON serialization. - dispatch([api_user, api_password, api_url])- POST the job to SQUASH, LSST Data Management’s metric dashboard. - jsonify_dict(d)- Recursively build JSON-renderable objects on all values in a dict. - load_metrics_package([package_name_or_path, ...])- Create a Job with metrics and specifications pre-loaded from a Verification Framework metrics package, such as verify_metrics. - reload_metrics_package([...])- Load a metrics package and add metric and specification definitions to the Job, as well as the collected measurements. - report([name, spec_tags, metric_tags])- Create a verification report that lists the pass/fail status of measurements against specifications in this job. - write(filename)- Write a JSON serialization to the filesystem. - write_json(filepath)- Write JSON to a file. - Attributes Documentation - 
measurements¶
- Measurements associated with the pipeline verification job ( - MeasurementSet).
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specs¶
- Specifications associated with the pipeline verifification job ( - SpecificationSet).
 - Methods Documentation - 
classmethod deserialize(measurements=None, blobs=None, metrics=None, specs=None, meta=None)[source]¶
- Deserialize a Verification Framework Job from a JSON serialization. - Parameters: - measurements : - list, optional- List of serialized - Measurementobjects.- blobs : - list, optional- List of serialized - Blobobjects.- metrics : - list, optional- List of serialized - Metricobjects.- specs : - list, optional- List of serialized specification objects. - meta : - dict, optional- Dictionary of key-value metadata entries. - Returns: - job : - Job- Jobinstance built from serialized data.- Examples - Together, - Job.jsonand- Job.deserializeallow a verification job to be serialized and later re-instantiated.- >>> import json >>> job = Job() >>> json_str = json.dumps(job.json) >>> json_obj = json.loads(json_str) >>> new_job = Job.deserialize(**json_obj) 
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dispatch(api_user=None, api_password=None, api_url='https://squash-restful-api.lsst.codes', **kwargs)[source]¶
- POST the job to SQUASH, LSST Data Management’s metric dashboard. - Parameters: - api_url : - str, optional- Root URL of the SQUASH API server. - api_user : - str, optional- API username. - api_password : - str, optional- API password. - **kwargs : optional - Additional keyword arguments passed to - lsst.verify.squash.post.
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jsonify_dict(d)¶
- Recursively build JSON-renderable objects on all values in a dict. - Parameters: - d : - dict- Dictionary to convert into a JSON-serializable object. Values are recursively JSON-ified. - Returns: - json_dict : - dict- Dictionary that can be serialized to JSON. - Examples - Subclasses can use this method to prepare output in their - json-method implementation. For example:- def json(self): return JsonSerializationMixin.jsonify_dict({ 'value': self.value, }) 
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classmethod load_metrics_package(package_name_or_path='verify_metrics', subset=None, measurements=None, meta=None)[source]¶
- Create a Job with metrics and specifications pre-loaded from a Verification Framework metrics package, such as verify_metrics. - Parameters: - package_name_or_path : - str, optional- Name of an EUPS package that hosts metric and specification definition YAML files or the file path to a metrics package. - 'verify_metrics'is the default package, and is where metrics and specifications are defined for most LSST Science Pipelines packages.- subset : - str, optional- If set, only metrics and specification for this package are loaded. For example, if - subset='validate_drp', only- validate_drpmetrics are loaded. This argument is equivalent to the- MetricSet.subsetmethod. Default is- None.- measurements : - MeasurementSetor- listof- Measurements, optional- Measurements to report in the Job. - meta : - dict, optional- Optional dictionary of metadata key-value entries to include in the Job. - Returns: - job : - Job- Jobinstance.
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reload_metrics_package(package_name_or_path='verify_metrics', subset=None)[source]¶
- Load a metrics package and add metric and specification definitions to the Job, as well as the collected measurements. - Parameters: - package_name_or_path : - str, optional- Name of an EUPS package that hosts metric and specification definition YAML files or the file path to a metrics package. - 'verify_metrics'is the default package, and is where metrics and specifications are defined for most packages.- subset : - str, optional- If set, only metrics and specification for this package are loaded. For example, if - subset='validate_drp', only- validate_drpmetrics are included in the- MetricSet. This argument is equivalent to the- MetricSet.subsetmethod. Default is- None.- Notes - This method is useful for loading metric and specification definitions into a job that was created without this information. In addition to being added to - Job.metrics, metrics are also attached to- Job.measurementsitems. This ensures that measurement values are normalized into the units of the metric definition when a Job is serialized.
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report(name=None, spec_tags=None, metric_tags=None)[source]¶
- Create a verification report that lists the pass/fail status of measurements against specifications in this job. - In a Jupyter notebook, this report can be shown as an inline table. - Parameters: - name : - stror- lsst.verify.Name, optional- A package or metric name to subset specifications by. When set, only measurement and specification combinations belonging to that package or metric are included in the report. - spec_tags : sequence of - str, optional- A set of specification tag strings. when given, only specifications that have all the given tags are included in the report. For example, - spec_tags=['LPM-17', 'minimum'].- metric_tags : sequence of - str, optional- A set of metric tag strings. When given, only specifications belonging to metrics that posess all given tags are included in the report. For example, - metric_tags=['LPM-17', 'photometry']selects sepifications that have both the- 'LPM-17'and- 'photometry'tags.- Returns: - report : - lsst.verify.Report- Report instance. In a Jupyter notebook, you can view the report by calling - Report.show.- See also - Notes - This method uses the - lsst.verify.SpecificationSet.reportAPI to create the- lsst.verify.Report, automatically inserting the- Job‘s measurements and metadata for filtering specifiation tests.- In a Jupyter notebook environment, use the - lsst.verify.Report.showmethod to view an interactive HTML table.- job = lsst.verify.Job() # ... report = job.report() report.show() 
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write(filename)[source]¶
- Write a JSON serialization to the filesystem. - Parameters: - filename : - str- Name of the JSON file (including directories). This name should be unique among all task executions in a pipeline. The recommended extension is - '.verify.json'. This convention is used by post-processing tools to discover verification framework outputs.
 
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