ProcessBrightStarsTask¶
-
class
lsst.pipe.tasks.processBrightStars.
ProcessBrightStarsTask
(butler=None, initInputs=None, *args, **kwargs)¶ Bases:
lsst.pipe.base.PipelineTask
The description of the parameters for this Task are detailed in
PipelineTask
.Parameters: - initInputs :
Unknown
- *args
Additional positional arguments.
- **kwargs
Additional keyword arguments.
Notes
ProcessBrightStarsTask
is used to extract, process, and store small image cut-outs (or “postage stamps”) around bright stars. It relies on three methods, called in succession:extractStamps
- Find bright stars within the exposure using a reference catalog and extract a stamp centered on each.
warpStamps
- Shift and warp each stamp to remove optical distortions and sample all stars on the same pixel grid.
measureAndNormalize
- Compute the flux of an object in an annulus and normalize it. This is required to normalize each bright star stamp as their central pixels are likely saturated and/or contain ghosts, and cannot be used.
Attributes Summary
canMultiprocess
Methods Summary
applySkyCorr
(calexp, skyCorr)Apply correction to the sky background level. emptyMetadata
()Empty (clear) the metadata for this Task and all sub-Tasks. extractStamps
(inputExposure[, refObjLoader])Read position of bright stars within inputExposure
from refCat and extract them.getFullMetadata
()Get metadata for all tasks. getFullName
()Get the task name as a hierarchical name including parent task names. getName
()Get the name of the task. getResourceConfig
()Return resource configuration for this task. getTaskDict
()Get a dictionary of all tasks as a shallow copy. makeField
(doc)Make a lsst.pex.config.ConfigurableField
for this task.makeSubtask
(name, **keyArgs)Create a subtask as a new instance as the name
attribute of this task.run
(inputExposure[, refObjLoader, dataId, …])Identify bright stars within an exposure using a reference catalog, extract stamps around each, then preprocess them. runQuantum
(butlerQC, inputRefs, outputRefs)Method to do butler IO and or transforms to provide in memory objects for tasks run method timer
(name, logLevel)Context manager to log performance data for an arbitrary block of code. warpStamps
(stamps, pixCenters)Warps and shifts all given stamps so they are sampled on the same pixel grid and centered on the central pixel. Attributes Documentation
-
canMultiprocess
= True¶
Methods Documentation
-
applySkyCorr
(calexp, skyCorr)¶ Apply correction to the sky background level.
Sky corrections can be generated with the ‘skyCorrection.py’ executable in pipe_drivers. Because the sky model used by that code extends over the entire focal plane, this can produce better sky subtraction. The calexp is updated in-place.
Parameters: - calexp :
lsst.afw.image.Exposure
orlsst.afw.image.MaskedImage
Calibrated exposure.
- skyCorr :
lsst.afw.math.backgroundList.BackgroundList
orNone
, optional
Full focal plane sky correction, obtained by running
lsst.pipe.drivers.skyCorrection.SkyCorrectionTask
.
- calexp :
-
emptyMetadata
() → None¶ Empty (clear) the metadata for this Task and all sub-Tasks.
-
extractStamps
(inputExposure, refObjLoader=None)¶ Read position of bright stars within
inputExposure
from refCat and extract them.Parameters: - inputExposure :
afwImage.exposure.exposure.ExposureF
The image from which bright star stamps should be extracted.
- refObjLoader :
lsst.meas.algorithms.ReferenceObjectLoader
, optional Loader to find objects within a reference catalog.
Returns: - result :
lsst.pipe.base.Struct
Results as a struct with attributes:
- inputExposure :
-
getFullMetadata
() → lsst.pipe.base._task_metadata.TaskMetadata¶ Get metadata for all tasks.
Returns: - metadata :
TaskMetadata
The keys are the full task name. Values are metadata for the top-level task and all subtasks, sub-subtasks, etc.
Notes
The returned metadata includes timing information (if
@timer.timeMethod
is used) and any metadata set by the task. The name of each item consists of the full task name with.
replaced by:
, followed by.
and the name of the item, e.g.:topLevelTaskName:subtaskName:subsubtaskName.itemName
using
:
in the full task name disambiguates the rare situation that a task has a subtask and a metadata item with the same name.- metadata :
-
getFullName
() → str¶ Get the task name as a hierarchical name including parent task names.
Returns: - fullName :
str
The full name consists of the name of the parent task and each subtask separated by periods. For example:
- The full name of top-level task “top” is simply “top”.
- The full name of subtask “sub” of top-level task “top” is “top.sub”.
- The full name of subtask “sub2” of subtask “sub” of top-level task “top” is “top.sub.sub2”.
- fullName :
-
getResourceConfig
() → Optional[ResourceConfig]¶ Return resource configuration for this task.
Returns: - Object of type
ResourceConfig
orNone
if resource - configuration is not defined for this task.
- Object of type
-
getTaskDict
() → Dict[str, weakref.ReferenceType[lsst.pipe.base.task.Task]]¶ Get a dictionary of all tasks as a shallow copy.
Returns: - taskDict :
dict
Dictionary containing full task name: task object for the top-level task and all subtasks, sub-subtasks, etc.
- taskDict :
-
classmethod
makeField
(doc: str) → lsst.pex.config.configurableField.ConfigurableField¶ Make a
lsst.pex.config.ConfigurableField
for this task.Parameters: - doc :
str
Help text for the field.
Returns: - configurableField :
lsst.pex.config.ConfigurableField
A
ConfigurableField
for this task.
Examples
Provides a convenient way to specify this task is a subtask of another task.
Here is an example of use:
class OtherTaskConfig(lsst.pex.config.Config): aSubtask = ATaskClass.makeField("brief description of task")
- doc :
-
makeSubtask
(name: str, **keyArgs) → None¶ Create a subtask as a new instance as the
name
attribute of this task.Parameters: - name :
str
Brief name of the subtask.
- keyArgs
Extra keyword arguments used to construct the task. The following arguments are automatically provided and cannot be overridden:
- “config”.
- “parentTask”.
Notes
The subtask must be defined by
Task.config.name
, an instance ofConfigurableField
orRegistryField
.- name :
-
run
(inputExposure, refObjLoader=None, dataId=None, skyCorr=None)¶ Identify bright stars within an exposure using a reference catalog, extract stamps around each, then preprocess them. The preprocessing steps are: shifting, warping and potentially rotating them to the same pixel grid; computing their annular flux and normalizing them.
Parameters: - inputExposure :
afwImage.exposure.exposure.ExposureF
The image from which bright star stamps should be extracted.
- refObjLoader :
lsst.meas.algorithms.ReferenceObjectLoader
, optional Loader to find objects within a reference catalog.
- dataId :
dict
orlsst.daf.butler.DataCoordinate
The dataId of the exposure (and detector) bright stars should be extracted from.
- skyCorr :
lsst.afw.math.backgroundList.BackgroundList
orNone
, optional
Full focal plane sky correction, obtained by running
lsst.pipe.drivers.skyCorrection.SkyCorrectionTask
.
Returns: - result :
lsst.pipe.base.Struct
Results as a struct with attributes:
brightStarStamps
(
bSS.BrightStarStamps
)
- inputExposure :
-
runQuantum
(butlerQC, inputRefs, outputRefs)¶ Method to do butler IO and or transforms to provide in memory objects for tasks run method
Parameters: - butlerQC :
ButlerQuantumContext
A butler which is specialized to operate in the context of a
lsst.daf.butler.Quantum
.- inputRefs :
InputQuantizedConnection
Datastructure whose attribute names are the names that identify connections defined in corresponding
PipelineTaskConnections
class. The values of these attributes are thelsst.daf.butler.DatasetRef
objects associated with the defined input/prerequisite connections.- outputRefs :
OutputQuantizedConnection
Datastructure whose attribute names are the names that identify connections defined in corresponding
PipelineTaskConnections
class. The values of these attributes are thelsst.daf.butler.DatasetRef
objects associated with the defined output connections.
- butlerQC :
-
timer
(name: str, logLevel: int = 10) → Iterator[None]¶ Context manager to log performance data for an arbitrary block of code.
Parameters: See also
timer.logInfo
Examples
Creating a timer context:
with self.timer("someCodeToTime"): pass # code to time
-
warpStamps
(stamps, pixCenters)¶ Warps and shifts all given stamps so they are sampled on the same pixel grid and centered on the central pixel. This includes rotating the stamp depending on detector orientation.
Parameters: - stamps :
collections.abc.Sequence
[
afwImage.exposure.exposure.ExposureF
]Image cutouts centered on a single object.
- pixCenters :
collections.abc.Sequence
[geom.Point2D
] Positions of each object’s center (as obtained from the refCat), in pixels.
Returns: - result :
lsst.pipe.base.Struct
Results as a struct with attributes:
warpedStars
List of stamps of warped stars (
list
ofafwImage.maskedImage.maskedImage.MaskedImage
).warpTransforms
List of the corresponding Transform from the initial star stamp to the common model grid (
list
ofafwGeom.TransformPoint2ToPoint2
).xy0s
List of coordinates of the bottom-left pixels of each stamp, before rotation (
list
ofgeom.Point2I
).nb90Rots
The number of 90 degrees rotations required to compensate for detector orientation (
int
).
- stamps :
- initInputs :