ConsolidateInjectedCatalogsTask¶

class lsst.source.injection.ConsolidateInjectedCatalogsTask(*, config: PipelineTaskConfig | None = None, log: logging.Logger | LsstLogAdapter | None = None, initInputs: dict[str, Any] | None = None, **kwargs: Any)¶

Bases: PipelineTask

Class for combining all tables in a collection of input catalogs into one table.

Attributes Summary

canMultiprocess

Methods Summary

`emptyMetadata`()	Empty (clear) the metadata for this Task and all sub-Tasks.
`getFullMetadata`()	Get metadata for all tasks.
`getFullName`()	Get the task name as a hierarchical name including parent task names.
`getName`()	Get the name of the task.
`getTaskDict`()	Get a dictionary of all tasks as a shallow copy.
`makeField`(doc)	Make a `lsst.pex.config.ConfigurableField` for this task.
`makeSubtask`(name, **keyArgs)	Create a subtask as a new instance as the `name` attribute of this task.
`run`(catalog_dict, skymap, tract[, ...])	Consolidate all tables in catalog_dict into one table.
`runQuantum`(butlerQC, input_refs, output_refs)	Do butler IO and transform to provide in memory objects for tasks `run` method.
`timer`(name[, logLevel])	Context manager to log performance data for an arbitrary block of code.

Attributes Documentation

canMultiprocess: ClassVar[bool] = True¶

Methods Documentation

emptyMetadata() → None¶: Empty (clear) the metadata for this Task and all sub-Tasks.

getFullMetadata() → TaskMetadata¶

Get metadata for all tasks.

Returns:

metadataTaskMetadata: The keys are the full task name. Values are metadata for the top-level task and all subtasks, sub-subtasks, etc.

Notes

The returned metadata includes timing information (if @timer.timeMethod is used) and any metadata set by the task. The name of each item consists of the full task name with . replaced by :, followed by . and the name of the item, e.g.:

topLevelTaskName:subtaskName:subsubtaskName.itemName

using : in the full task name disambiguates the rare situation that a task has a subtask and a metadata item with the same name.

getFullName() → str¶

Get the task name as a hierarchical name including parent task names.

Returns:

fullNamestr

The full name consists of the name of the parent task and each subtask separated by periods. For example:

The full name of top-level task “top” is simply “top”.
The full name of subtask “sub” of top-level task “top” is “top.sub”.
The full name of subtask “sub2” of subtask “sub” of top-level task “top” is “top.sub.sub2”.

getName() → str¶

Get the name of the task.

Returns:

taskNamestr: Name of the task.

See also

getFullName: Get the full name of the task.

getTaskDict() → dict[str, weakref.ReferenceType[lsst.pipe.base.task.Task]]¶

Get a dictionary of all tasks as a shallow copy.

Returns:

taskDictdict: Dictionary containing full task name: task object for the top-level task and all subtasks, sub-subtasks, etc.

classmethod makeField(doc: str) → ConfigurableField¶

Make a lsst.pex.config.ConfigurableField for this task.

Parameters:

docstr: Help text for the field.

Returns:

configurableFieldlsst.pex.config.ConfigurableField: A ConfigurableField for this task.

Examples

Provides a convenient way to specify this task is a subtask of another task.

Here is an example of use:

class OtherTaskConfig(lsst.pex.config.Config):
    aSubtask = ATaskClass.makeField("brief description of task")

makeSubtask(name: str, **keyArgs: Any) → None¶

Create a subtask as a new instance as the name attribute of this task.

Parameters:

namestr

Brief name of the subtask.

**keyArgs

Extra keyword arguments used to construct the task. The following arguments are automatically provided and cannot be overridden:

config.
parentTask.

Notes

The subtask must be defined by Task.config.name, an instance of ConfigurableField or RegistryField.

run(catalog_dict: dict, skymap: BaseSkyMap, tract: int, pixel_match_radius: float = 0.1, get_catalogs_from_butler: bool = True, col_ra: str = 'ra', col_dec: str = 'dec', col_mag: str = 'mag', isPatchInnerKey='injected_isPatchInner', isTractInnerKey='injected_isTractInner', isPrimaryKey='injected_isPrimary', injectionKey='injection_flag') → Table¶

Consolidate all tables in catalog_dict into one table.

catalog_dict: dict: A dictionary with photometric bands for keys and astropy tables for items.
skymap: lsst.skymap.BaseSkyMap: A base skymap.
tract: int: The tract where sources have been injected.
pixel_match_radius: float: Match radius in pixels to use for self-matching catalogs across different bands.
col_ra: str: Column name for right ascension (in degrees).
col_dec: str: Column name for declination (in degrees).
col_mag: str: Column name for magnitude.
isPatchInnerKey: str: Column name for the isPatchInner flag.
isTractInnerKey: str: Column name for the isTractInner flag.
isPrimaryKey: str: Column name for the isPrimary flag.
injectionKey: str: Column name for the injection flag.

Returns:

output_structlsst.pipe.base.Struct

contains :

multiband_catalog: astropy.table.Table: A single table containing all information of the separate tables in catalog_dict

runQuantum(butlerQC, input_refs, output_refs)¶

Do butler IO and transform to provide in memory objects for tasks run method.

Parameters:

butlerQCQuantumContext: A butler which is specialized to operate in the context of a lsst.daf.butler.Quantum.
inputRefsInputQuantizedConnection: Datastructure whose attribute names are the names that identify connections defined in corresponding PipelineTaskConnections class. The values of these attributes are the lsst.daf.butler.DatasetRef objects associated with the defined input/prerequisite connections.
outputRefsOutputQuantizedConnection: Datastructure whose attribute names are the names that identify connections defined in corresponding PipelineTaskConnections class. The values of these attributes are the lsst.daf.butler.DatasetRef objects associated with the defined output connections.

timer(name: str, logLevel: int = 10) → Iterator[None]¶

Context manager to log performance data for an arbitrary block of code.

Parameters:

namestr: Name of code being timed; data will be logged using item name: Start and End.
logLevelint: A logging level constant.

Navigation

ConsolidateInjectedCatalogsTask¶