AssembleCcdTask

class lsst.ip.isr.AssembleCcdTask(**kwargs)

Bases: Task

Assemble a set of amplifier images into a full detector size set of pixels.

The keys for removal specified in lsst.ip.isr.AssembleCcdConfig.keysToRemove are added to a default set: (‘DATASEC’, ‘BIASSEC’, ‘TRIMSEC’, ‘GAIN’).

Methods Summary

assembleCcd(assembleInput)

Assemble a set of amps into a single CCD size image.

emptyMetadata()

Empty (clear) the metadata for this Task and all sub-Tasks.

getFullMetadata()

Get metadata for all tasks.

getFullName()

Get the task name as a hierarchical name including parent task names.

getName()

Get the name of the task.

getTaskDict()

Get a dictionary of all tasks as a shallow copy.

makeField(doc)

Make a lsst.pex.config.ConfigurableField for this task.

makeSubtask(name, **keyArgs)

Create a subtask as a new instance as the name attribute of this task.

postprocessExposure(outExposure, inExposure)

Set exposure non-image attributes, including wcs and metadata and display exposure (if requested).

timer(name[, logLevel])

Context manager to log performance data for an arbitrary block of code.

Methods Documentation

assembleCcd(assembleInput)

Assemble a set of amps into a single CCD size image.

Parameters:
assembleInputdict [str, lsst.afw.image.Exposure] or lsst.afw.image.Exposure

Either a dictionary of amp exposures, or a single exposure containing all raw amps. If a dictionary of amp exposures, the key should be the amp name.

Returns:
assembledCcdlsst.afw.image.Exposure

An exposure of the assembled amp sections.

Raises:
TypeError

Raised if the input exposures to be assembled do not adhere to the required format.

RuntimeError

Raised if the detector set on the input exposure is not set.

emptyMetadata() None

Empty (clear) the metadata for this Task and all sub-Tasks.

getFullMetadata() TaskMetadata

Get metadata for all tasks.

Returns:
metadataTaskMetadata

The keys are the full task name. Values are metadata for the top-level task and all subtasks, sub-subtasks, etc.

Notes

The returned metadata includes timing information (if @timer.timeMethod is used) and any metadata set by the task. The name of each item consists of the full task name with . replaced by :, followed by . and the name of the item, e.g.:

topLevelTaskName:subtaskName:subsubtaskName.itemName

using : in the full task name disambiguates the rare situation that a task has a subtask and a metadata item with the same name.

getFullName() str

Get the task name as a hierarchical name including parent task names.

Returns:
fullNamestr

The full name consists of the name of the parent task and each subtask separated by periods. For example:

  • The full name of top-level task “top” is simply “top”.

  • The full name of subtask “sub” of top-level task “top” is “top.sub”.

  • The full name of subtask “sub2” of subtask “sub” of top-level task “top” is “top.sub.sub2”.

getName() str

Get the name of the task.

Returns:
taskNamestr

Name of the task.

See also

getFullName

Get the full name of the task.

getTaskDict() dict[str, weakref.ReferenceType[lsst.pipe.base.task.Task]]

Get a dictionary of all tasks as a shallow copy.

Returns:
taskDictdict

Dictionary containing full task name: task object for the top-level task and all subtasks, sub-subtasks, etc.

classmethod makeField(doc: str) ConfigurableField

Make a lsst.pex.config.ConfigurableField for this task.

Parameters:
docstr

Help text for the field.

Returns:
configurableFieldlsst.pex.config.ConfigurableField

A ConfigurableField for this task.

Examples

Provides a convenient way to specify this task is a subtask of another task.

Here is an example of use:

class OtherTaskConfig(lsst.pex.config.Config):
    aSubtask = ATaskClass.makeField("brief description of task")
makeSubtask(name: str, **keyArgs: Any) None

Create a subtask as a new instance as the name attribute of this task.

Parameters:
namestr

Brief name of the subtask.

**keyArgs

Extra keyword arguments used to construct the task. The following arguments are automatically provided and cannot be overridden:

  • config.

  • parentTask.

Notes

The subtask must be defined by Task.config.name, an instance of ConfigurableField or RegistryField.

postprocessExposure(outExposure, inExposure)

Set exposure non-image attributes, including wcs and metadata and display exposure (if requested).

Call after assembling the pixels.

Parameters:
outExposurelsst.afw.image.Exposure

The exposure to modify by copying metadata (after removing unwanted keywords), wcs, filter, and detector from inExposure.

inExposurelsst.afw.image.Exposure

The input exposure providing metadata, wcs, filter, and detector.

timer(name: str, logLevel: int = 10) Iterator[None]

Context manager to log performance data for an arbitrary block of code.

Parameters:
namestr

Name of code being timed; data will be logged using item name: Start and End.

logLevelint

A logging level constant.

See also

lsst.utils.timer.logInfo

Implementation function.

Examples

Creating a timer context:

with self.timer("someCodeToTime"):
    pass  # code to time